RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 METTL15P1P0C7V9 234 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 CSRP1P21291 193 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 EVI2AP22794 236 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 KDELR1P24390 212 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 PEBP1P30086 187 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 AQP4P55087 323 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 RPL26P61254 145 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 RRAS2P62070 204 aaPredicted RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 KLRD1Q13241 179 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 CDK5R1Q15078 307 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 LY6EQ16553 131 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 MORN2Q502X0 79 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 HSD17B12Q53GQ0 312 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 RNASE10Q5GAN6 216 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 Q8NDZ9 215 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 OR4B1Q8NGF8 309 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 OR2T35Q8NGX2 323 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 ARL11Q969Q4 196 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 CHCHD1Q96BP2 118 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 PKMYT1Q99640 499 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 NDUFB11Q9NX14 153 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 NHP2Q9NX24 153 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 OR5AC2Q9NZP5 309 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 RPL26L1Q9UNX3 145 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 DYSFO75923 2080 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 LOXHD1Q8IVV2 1947 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 KIAA1671Q9BY89 1806 aa1.26□□□□□ -2.21
SRP54-204ENST00000553923 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.26□□□□□ -2.21
SRP54-204ENST00000553923 MED1Q15648 1581 aaPredicted RBP1.25□□□□□ -2.21
SRP54-204ENST00000553923 TOPBP1Q92547 1522 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 A2MP01023 1474 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 NCOA3Q9Y6Q9 1424 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 SCN10AQ9Y5Y9 1956 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 MED23Q9ULK4 1368 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 DOCK5Q9H7D0 1870 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 BRWD3Q6RI45 1802 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 IGKV1D-42A0A075B6H8 117 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 TMSB15BA0A087X1C1 80 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.25□□□□□ -2.21
SRP54-204ENST00000553923 OR2T8A6NH00 312 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 A8MWV9 139 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 TCRAP04437 139 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 COX6A1P12074 109 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 TPT1P13693 172 aaKnown RBP1.25□□□□□ -2.21
SRP54-204ENST00000553923 CRYGSP22914 178 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 RPL22P35268 128 aaKnown RBP1.25□□□□□ -2.21
SRP54-204ENST00000553923 FOXA3P55318 350 aaPredicted RBP1.25□□□□□ -2.21
SRP54-204ENST00000553923 COPZ1P61923 177 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 RPS25P62851 125 aaKnown RBP1.25□□□□□ -2.21
SRP54-204ENST00000553923 ZNF90Q03938 601 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 ZNF345Q14585 488 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 SPCS2Q15005 226 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 NNATQ16517 81 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 WHAMMP3Q1A5X7 153 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 ESRGQ1W209 222 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 Q6ZQT0 140 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 C7orf65Q6ZTY9 151 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 CTAGE3PQ8IX95 158 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 DYNAPQ8N1N2 210 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 MMGT1Q8N4V1 131 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 FAM216BQ8N7L0 139 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 C3orf56Q8N813 242 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 LINC00301Q8NCQ3 95 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 OR4S1Q8NGB4 309 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 OR8B3Q8NGG8 313 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 ZNF418Q8TF45 676 aaPredicted RBP1.25□□□□□ -2.21
SRP54-204ENST00000553923 RETNLBQ9BQ08 111 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 FKBP11Q9NYL4 201 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 TAS2R4Q9NYW5 299 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 ERG28Q9UKR5 140 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 LY96Q9Y6Y9 160 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 CEP152O94986 1710 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 LTBP4Q8N2S1 1624 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 CHD5Q8TDI0 1954 aa1.25□□□□□ -2.21
SRP54-204ENST00000553923 ARAP1Q96P48 1450 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 RIC1Q4ADV7 1423 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 TRAPPC8Q9Y2L5 1435 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 ROCK2O75116 1388 aaKnown RBP1.24□□□□□ -2.21
SRP54-204ENST00000553923 DSPPQ9NZW4 1301 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 A0A096LPI6 279 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 IGKV2-24A0A0C4DH68 120 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 TRBV7-6A0A0J9YX20 115 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 TRBV27A0A0K0K1C4 114 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 A0A1W2PNM2 257 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 LRCOL1A6NCL2 159 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 ATP6V1G2-DDX39BF2Z307 99 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 F8W036 122 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 M0R233 179 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 DLEU1O43261 78 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 LYRM1O43325 122 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 IGLV6-57P01721 117 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 SLC25A5P05141 298 aaKnown RBP1.24□□□□□ -2.21
SRP54-204ENST00000553923 IGLC6P0CF74 106 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 LINC00694P0DN24 101 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 MAXP61244 160 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 LSM3P62310 102 aaKnown RBP1.24□□□□□ -2.21
SRP54-204ENST00000553923 ZNF181Q2M3W8 571 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 ZNF791Q3KP31 576 aaPredicted RBP1.24□□□□□ -2.21
SRP54-204ENST00000553923 TMEM155Q4W5P6 130 aa1.24□□□□□ -2.21
SRP54-204ENST00000553923 GLYATL3Q5SZD4 288 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms