RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 RNASE8Q8TDE3 154 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-206ENST00000553888 TMUB1Q9BVT8 246 aa10.01□□□□□ -0.81
VIPAS39-206ENST00000553888 TMEM241Q24JQ0 296 aa10.01□□□□□ -0.81
VIPAS39-206ENST00000553888 DMRTA1Q5VZB9 504 aa10.01□□□□□ -0.81
VIPAS39-206ENST00000553888 ZFP82Q8N141 532 aa10.01□□□□□ -0.81
VIPAS39-206ENST00000553888 SRSF8Q9BRL6 282 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-206ENST00000553888 TLN2Q9Y4G6 2542 aa10.01□□□□□ -0.81
VIPAS39-206ENST00000553888 GGTLC3B5MD39 225 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 HLA-DRB1P01911 266 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 AMY1AP04745 511 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 CRYBA1P05813 215 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 UBE2L3P68036 154 aaKnown RBP10□□□□□ -0.81
VIPAS39-206ENST00000553888 RNF212Q495C1 297 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 REC114Q7Z4M0 266 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 TTC9CQ8N5M4 171 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 C5orf56Q8N8D9 126 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 CCDC168Q8NDH2 2452 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 C1RLQ9NZP8 487 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 NAT8Q9UHE5 227 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 F8W735 103 aaPredicted RBP10□□□□□ -0.81
VIPAS39-206ENST00000553888 S100A8P05109 93 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
VIPAS39-206ENST00000553888 PLA2G2AP14555 144 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 SELENOTP62341 195 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 UNQ5815/PRO19632Q6UWF5 114 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 H3BUX3 64 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 SMAD7O15105 426 aaKnown RBP10□□□□□ -0.81
VIPAS39-206ENST00000553888 SLC25A16P16260 332 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 DSCR9P59020 149 aa10□□□□□ -0.81
VIPAS39-206ENST00000553888 IGHV3-35A0A0C4DH35 117 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 PDE6DO43924 150 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 TGFAP01135 160 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 TAS2R45P59539 299 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 PQLC2Q6ZP29 291 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 STXBP6Q8NFX7 210 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 OR1L4Q8NGR5 311 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 C2CD4CQ8TF44 421 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 MRPL32Q9BYC8 188 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 CREBBPQ92793 2442 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 ITPR3Q14573 2671 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 IGHV3OR16-8A0A075B7F1 116 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 CXCL1P09341 107 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 CRYBB3P26998 211 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 NECAP1Q8NC96 275 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 BLNKQ8WV28 456 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 YPEL4Q96NS1 127 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 C19orf24Q9BVV8 132 aa9.99□□□□□ -0.81
VIPAS39-206ENST00000553888 TGIF2-C20orf24A0A0A6YYL0 155 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 OR2T8A6NH00 312 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 HYPMO75409 117 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 DEFB113Q30KQ7 82 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 Q6ZS46 218 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 C15orf54Q8N8G6 183 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 SGMS2Q8NHU3 365 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 Q8WTZ3 238 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 MS4A10Q96PG2 267 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 ITPR2Q14571 2701 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 TRAV34A0A0B4J273 112 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 Q56UQ5 140 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 C16orf82Q7Z2V1 217 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 LINC01356Q8N9X3 169 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 FXYD5Q96DB9 178 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 TMEM167BQ9NRX6 74 aa9.98□□□□□ -0.81
VIPAS39-206ENST00000553888 ZNF48Q96MX3 618 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 ELOVL1Q9BW60 279 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 MEGF9Q9H1U4 602 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 FBXL7Q9UJT9 491 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 CXorf65A6NEN9 183 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 F6UZH7 168 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 GNG7O60262 68 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 ELOBQ15370 118 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 RNF151Q2KHN1 245 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 GCN1Q92616 2671 aaKnown RBP9.97□□□□□ -0.81
VIPAS39-206ENST00000553888 A0A087WWC5 75 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 LINC00614P0C842 121 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 LINC01551Q86U37 167 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 Q96MF0 132 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 TUBA4BQ9H853 241 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 MOB4Q9Y3A3 225 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 ELOA3CA0A087WX78 387 aaPredicted RBP9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 A0A1W2PPQ1 181 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 IL4P05112 153 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 RANP62826 216 aaKnown RBP9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 LBHQ53QV2 105 aaPredicted RBP9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 CHRDL1Q9BU40 450 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 C21orf62Q9NYP8 219 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 HIGD1AQ9Y241 93 aa9.96□□□□□ -0.81
VIPAS39-206ENST00000553888 PDZD2O15018 2839 aa9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 DLEU1O43261 78 aa9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 BRI3O95415 125 aa9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 BLCAPP62952 87 aa9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 GNG5P63218 68 aa9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 PRSS57Q6UWY2 283 aa9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 KRTAP1-3Q8IUG1 177 aa9.96□□□□□ -0.82
VIPAS39-206ENST00000553888 RNF2Q99496 336 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms