RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.8
ATXN3-223ENST00000553686 TRAV5A0A0B4J249 113 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 ZNF705GA8MUZ8 300 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-223ENST00000553686 ZNF701M0R085 212 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-223ENST00000553686 UPK2O00526 184 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 GYG2O15488 501 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 SCGB2A1O75556 95 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 CD3GP09693 182 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 DAPP51397 102 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 WT1-ASQ06250 92 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 CD300CQ08708 224 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 RIGQ13278 110 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 UNC119Q13432 240 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 TIMM50Q3ZCQ8 353 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 CST9LP1Q5W188 147 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 EBLN2Q6P2I7 272 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 RPL22L1Q6P5R6 122 aaKnown RBP3.83□□□□□ -1.8
ATXN3-223ENST00000553686 FOXI2Q6ZQN5 318 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 SH2D6Q7Z4S9 175 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 NKAIN3Q8N8D7 197 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 ZNF709Q8N972 641 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 OR1P1Q8NH06 330 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 TRUB1Q8WWH5 349 aaKnown RBP3.83□□□□□ -1.8
ATXN3-223ENST00000553686 LSM10Q969L4 123 aaKnown RBP3.83□□□□□ -1.8
ATXN3-223ENST00000553686 IGF2BP2-AS1Q96M15 143 aa3.83□□□□□ -1.8
ATXN3-223ENST00000553686 RBMX2Q9Y388 322 aaKnown RBP3.83□□□□□ -1.8
ATXN3-223ENST00000553686 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 TRAV8-7A0A075B6U6 113 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 DENRO43583 198 aaKnown RBP3.82□□□□□ -1.8
ATXN3-223ENST00000553686 CIB2O75838 187 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 ID1P41134 155 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 RPL30P62888 115 aaKnown RBP3.82□□□□□ -1.8
ATXN3-223ENST00000553686 ST3GAL4Q11206 333 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 Q499Y3 187 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 ACSM3Q53FZ2 586 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 MEDAGQ5VYS4 303 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 LRTM2Q8N967 370 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 CIRBP-AS1Q8TBR5 109 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 TMEM56Q96MV1 263 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 HINT2Q9BX68 163 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 SLC35B3Q9H1N7 401 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 DCSTAMPQ9H295 470 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 SAV1Q9H4B6 383 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-223ENST00000553686 NRN1Q9NPD7 142 aa3.82□□□□□ -1.8
ATXN3-223ENST00000553686 A0A096LPF7 62 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 TEX50A0A1B0GTY4 177 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 A0A1W2PPK0 400 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 I3L2K1 104 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 J3QRK9 145 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 MT-CO2P00403 227 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 CDK1P06493 297 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 CD37P11049 281 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 NQO2P16083 231 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 CDKN1BP46527 198 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 HNRNPA3P51991 378 aaKnown RBP3.81□□□□□ -1.8
ATXN3-223ENST00000553686 TAS2R31P59538 309 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 ZNF79Q15937 498 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 ZNF493Q6ZR52 646 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 TMED4Q7Z7H5 227 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 DEFB107AQ8IZN7 70 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 FAM89BQ8N5H3 189 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 LINC00052Q96N35 136 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 SLC29A1Q99808 456 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 PAXXQ9BUH6 204 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 GSN-AS1Q9NRJ2 163 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 NDUFA4L2Q9NRX3 87 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 BABAM2Q9NXR7 383 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 CLEC2DQ9UHP7 191 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 SPATA2Q9UM82 520 aa3.81□□□□□ -1.8
ATXN3-223ENST00000553686 SMIM31A0A1B0GVY4 71 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 SOCS1O15524 211 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 RBFOX2O43251 390 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATXN3-223ENST00000553686 TMEM50AO95807 157 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 HPRT1P00492 218 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 INSP01308 110 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 ETV6P41212 452 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 HSPA13P48723 471 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 OPCMLQ14982 345 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 GDF5OSQ5U4N7 250 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 FAM78BQ5VT40 261 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 ZFP1Q6P2D0 407 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 H1FOOQ8IZA3 346 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-223ENST00000553686 ZFP41Q8N8Y5 198 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 COQ8AQ8NI60 647 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 TMEM37Q8WXS4 190 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 C16orf74Q96GX8 76 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 LINC01587Q99440 93 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 TSC22D3Q99576 134 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 Q9H521 79 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 NOP10Q9NPE3 64 aaKnown RBP3.8□□□□□ -1.8
ATXN3-223ENST00000553686 FKBP11Q9NYL4 201 aa3.8□□□□□ -1.8
ATXN3-223ENST00000553686 PLAC8L1A1L4L8 177 aa3.79□□□□□ -1.8
ATXN3-223ENST00000553686 ZNF98A6NK75 572 aa3.79□□□□□ -1.8
ATXN3-223ENST00000553686 MFNGO00587 321 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms