RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 IGHV3-48P01763 117 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BJP06899 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 NBEAP1P0C6P0 100 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 TRGC1P0CF51 173 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 RD3LP0DJH9 198 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H1EP10412 219 aaKnown RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ORM2P19652 201 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BOP23527 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BBP33778 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 CDX1P47902 265 aaPredicted RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 CRIP2P52943 208 aaPredicted RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 MFAP4P55083 255 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BDP58876 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BCP62807 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 UBE2L3P68036 154 aaKnown RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 FABP9Q0Z7S8 132 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 KIAA0141Q14154 515 aaPredicted RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HES1Q14469 280 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST2H2BEQ16778 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 TMEM183BQ1AE95 376 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 TIGITQ495A1 244 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 COA6Q5JTJ3 125 aaKnown RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 FAM231DQ6ZW35 169 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF329Q86UD4 541 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 LYPD1Q8N2G4 141 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ARL6IP6Q8N6S5 226 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF491Q8N8L2 437 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 OR1B1Q8NGR6 318 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 VN1R17PQ8TDU5 208 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ARPC1AQ92747 370 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 FRZBQ92765 325 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BHQ93079 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 IGF2BP2-AS1Q96M15 143 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 CCL19Q99731 98 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BNQ99877 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIST1H2BMQ99879 126 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 RASL11BQ9BPW5 248 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 SLC25A39Q9BZJ4 359 aaPredicted RBP4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 IL36BQ9NZH7 164 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 EPDR1Q9UM22 224 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 HIGD1AQ9Y241 93 aa4.72□□□□□ -1.65
VIPAS39-204ENST00000553576 ITPR1Q14643 2758 aa4.71□□□□□ -1.65
VIPAS39-204ENST00000553576 AKAP6Q13023 2319 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 TRBV9A0A0B4J1U6 114 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 IGHV1-69DA0A0B4J2H0 117 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 IGHV4-61A0A0C4DH41 118 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 PGPEP1LA6NFU8 196 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 NCBP2LA6PVI3 153 aaKnown RBP4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 PPP5D1E7EU14 171 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 H3BRN7 92 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 IGHV1-69P01742 117 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 APELAP0DMC3 54 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 PYYP10082 97 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 GP9P14770 177 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 GATA3P23771 443 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 CD24P25063 80 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 SAA4P35542 130 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 GNG4P50150 75 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 CNN1P51911 297 aaKnown RBP4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 RPL15P61313 204 aaKnown RBP4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 NDPQ00604 133 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 COX19Q49B96 90 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 ACTL10Q5JWF8 245 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 CLEC2AQ6UVW9 174 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 C19orf35Q6ZS72 473 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 FAM110DQ8TAY7 271 aaPredicted RBP4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 RBM14Q96PK6 669 aaKnown RBP4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 MLST8Q9BVC4 326 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 PITPNC1Q9UKF7 332 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 V9GYV3 84 aa4.71□□□□□ -1.66
VIPAS39-204ENST00000553576 IGHV3-21A0A0B4J1V1 117 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 A0A1W2PPQ1 181 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 PGPA6NDG6 321 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF98A6NK75 572 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 PEX7O00628 323 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 MRPS12O15235 138 aaKnown RBP4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 SCGB2A1O75556 95 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 NDUFB8O95169 186 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 S100A7P31151 101 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 MEOX2P50222 304 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 ATP5J2P56134 94 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 NDUFA6P56556 154 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 RPL19P84098 196 aaKnown RBP4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 PDE6HQ13956 83 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 CENPWQ5EE01 88 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 FAM120AOSQ5T036 256 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF600Q6ZNG1 722 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 BPIFA4PQ86YQ2 179 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF843Q8N446 348 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 C5orf17Q8NAS9 161 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 NECAP1Q8NC96 275 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 OR5T1Q8NG75 326 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 PIFOQ8TCI5 191 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 MBD6Q96DN6 1003 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 RNF125Q96EQ8 232 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 GPR82Q96P67 336 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 FAM103A1Q9BTL3 118 aaKnown RBP4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 CHRDL1Q9BU40 450 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms