RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 NKX6-2Q9C056 277 aaPredicted RBP9.85□□□□□ -0.83
CACNB3-223ENST00000552480 TMEM14CQ9P0S9 112 aa9.85□□□□□ -0.83
CACNB3-223ENST00000552480 PUS1Q9Y606 427 aaKnown RBP eCLIP9.85□□□□□ -0.83
CACNB3-223ENST00000552480 A0A0G2JLM5 398 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 A0A1W2PRE2 83 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 SCO1O75880 301 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 PYYP10082 97 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 GP9P14770 177 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 RELQ04864 619 aaPredicted RBP9.84□□□□□ -0.83
CACNB3-223ENST00000552480 USF2Q15853 346 aaPredicted RBP9.84□□□□□ -0.83
CACNB3-223ENST00000552480 ATRAIDQ6UW56 229 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 CLRN3Q8NCR9 226 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 FXYD5Q96DB9 178 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 ZNF414Q96IQ9 312 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 GNB4Q9HAV0 340 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
CACNB3-223ENST00000552480 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.83□□□□□ -0.84
CACNB3-223ENST00000552480 DNAJC9-AS1A6NH13 148 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 BMPR1BO00238 502 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 PSMB8P28062 276 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 S100A7P31151 101 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 RAB9AP51151 201 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 SLC35B1P78383 322 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 KIAA0141Q14154 515 aaPredicted RBP9.83□□□□□ -0.84
CACNB3-223ENST00000552480 FAM74A3Q4VXF1 159 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 NIPSNAP3BQ9BS92 247 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 KLK15Q9H2R5 256 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 ZFAND3Q9H8U3 227 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 RABAC1Q9UI14 185 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 RNF24Q9Y225 148 aa9.83□□□□□ -0.84
CACNB3-223ENST00000552480 ITPR3Q14573 2671 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 H3BQ15 152 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 ARL3P36405 182 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 FOXE3Q13461 319 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 FAM209BQ5JX69 171 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 LEMD1Q68G75 181 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 ZNF343Q6P1L6 599 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 C11orf52Q96A22 123 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 DUX5Q96PT3 197 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 PARLQ9H300 379 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 ABCA1O95477 2261 aa9.82□□□□□ -0.84
CACNB3-223ENST00000552480 CREBBPQ92793 2442 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 SCO2A0A1W2PP80 73 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 ZNF98A6NK75 572 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 ZNF727A8MUV8 499 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 PPP5D1E7EU14 171 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 CLDN34H7C241 214 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 M0R036 132 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 LY6G6DO95868 133 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 ELANEP08246 267 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 NPPCP23582 126 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 AWAT1Q58HT5 328 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 TEX38Q6PEX7 206 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 ZNF329Q86UD4 541 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 BPIFA4PQ86YQ2 179 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 RPUSD4Q96CM3 377 aaKnown RBP9.81□□□□□ -0.84
CACNB3-223ENST00000552480 TVP23CQ96ET8 276 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 SMIM7Q9BQ49 75 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 AKAP9Q99996 3911 aa9.81□□□□□ -0.84
CACNB3-223ENST00000552480 IGHV3-35A0A0C4DH35 117 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 GGTLC3B5MD39 225 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 IGHV3-11P01762 117 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 NBEAP1P0C6P0 100 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 HIST1H1EP10412 219 aaKnown RBP9.8□□□□□ -0.84
CACNB3-223ENST00000552480 SRD5A1P18405 259 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 PNRC1Q12796 327 aaPredicted RBP9.8□□□□□ -0.84
CACNB3-223ENST00000552480 RHEBQ15382 184 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 LCNL1Q6ZST4 164 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 OR4F17Q8NGA8 305 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 OR4X2Q8NGF9 303 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 SMR3AQ99954 134 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 TCEAL7Q9BRU2 100 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 SDF2L1Q9HCN8 221 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 ESM1Q9NQ30 184 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 NAT8Q9UHE5 227 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 CDC42EP3Q9UKI2 254 aa9.8□□□□□ -0.84
CACNB3-223ENST00000552480 NDUFA4O00483 81 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 MRPS12O15235 138 aaKnown RBP9.79□□□□□ -0.84
CACNB3-223ENST00000552480 NDUFB4O95168 129 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 FOSL1P15407 271 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 MYCNOSP40205 109 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 RPL15P61313 204 aaKnown RBP9.79□□□□□ -0.84
CACNB3-223ENST00000552480 SUMO1P63165 101 aaKnown RBP9.79□□□□□ -0.84
CACNB3-223ENST00000552480 TMEM241Q24JQ0 296 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 C10orf99Q6UWK7 81 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 RNF152Q8N8N0 203 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 MYOZ3Q8TDC0 251 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 ZNF418Q8TF45 676 aaPredicted RBP9.79□□□□□ -0.84
CACNB3-223ENST00000552480 BLNKQ8WV28 456 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 TMEM190Q8WZ59 177 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 SERTAD4Q9NUC0 356 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 SVEP1Q4LDE5 3571 aa9.79□□□□□ -0.84
CACNB3-223ENST00000552480 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
CACNB3-223ENST00000552480 FAM181BA6NEQ2 426 aa9.78□□□□□ -0.84
CACNB3-223ENST00000552480 TRBV12-3P01733 135 aa9.78□□□□□ -0.84
CACNB3-223ENST00000552480 RNASE1P07998 156 aaKnown RBP9.78□□□□□ -0.84
CACNB3-223ENST00000552480 IGLC2P0DOY2 106 aa9.78□□□□□ -0.84
CACNB3-223ENST00000552480 BTN1A1Q13410 526 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms