RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 KLF12Q9Y4X4 402 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 F8W735 103 aaPredicted RBP11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 H3BRN7 92 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 ATP5J2P56134 94 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 PDZD11Q5EBL8 140 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 CLEC2AQ6UVW9 174 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 C5orf17Q8NAS9 161 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 RNF125Q96EQ8 232 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 ZNF586Q9NXT0 402 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 ASH1LQ9NR48 2969 aaKnown RBP11□□□□□ -0.65
RAB3IP-216ENST00000552199 XKRY2A2RUG3 117 aa11□□□□□ -0.65
RAB3IP-216ENST00000552199 PCP4L1A6NKN8 68 aa11□□□□□ -0.65
RAB3IP-216ENST00000552199 H3BTX0 84 aa11□□□□□ -0.65
RAB3IP-216ENST00000552199 IL4P05112 153 aa11□□□□□ -0.65
RAB3IP-216ENST00000552199 Q56UQ5 140 aa11□□□□□ -0.65
RAB3IP-216ENST00000552199 TMEM183AQ8IXX5 376 aa11□□□□□ -0.65
RAB3IP-216ENST00000552199 ATG101Q9BSB4 218 aa11□□□□□ -0.65
RAB3IP-216ENST00000552199 OR2J3O76001 311 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 UBE2G1P62253 170 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 FAM231DQ6ZW35 169 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 OR8I2Q8N0Y5 310 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 ABCA2Q9BZC7 2435 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 DOPEY1Q5JWR5 2465 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 IGHV1-69DA0A0B4J2H0 117 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 IGHV1-69P01742 117 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 BPIFA4PQ86YQ2 179 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 FAM110DQ8TAY7 271 aaPredicted RBP10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 RNF24Q9Y225 148 aa10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 SPTAN1Q13813 2472 aaKnown RBP10.99□□□□□ -0.65
RAB3IP-216ENST00000552199 IGHV4-30-2A0A087WSY4 118 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 SMIM27A0A1W2PRY6 76 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 PRB1P04280 392 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 TCRAP04437 139 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 S100A7AQ86SG5 101 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 OR10D4PQ8NGN7 298 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 SMIM12Q96EX1 92 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 TXN2Q99757 166 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 SERTAD4Q9NUC0 356 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 KLK9Q9UKQ9 250 aa10.98□□□□□ -0.65
RAB3IP-216ENST00000552199 ZNF705GA8MUZ8 300 aaPredicted RBP10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 FCGR2BP31994 310 aaPredicted RBP10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 USF2Q15853 346 aaPredicted RBP10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 UNQ5815/PRO19632Q6UWF5 114 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 OR4F17Q8NGA8 305 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 FMC1Q96HJ9 113 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 GPR82Q96P67 336 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 C7orf69Q9H7B7 122 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 NIT2Q9NQR4 276 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 FLNCQ14315 2725 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 TRBV19A0A075B6N1 114 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 IGHV3OR16-10A0A075B7F0 116 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 GATCO43716 136 aaKnown RBP10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 IGLC2P0DOY2 106 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 FABP4P15090 132 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 C5orf56Q8N8D9 126 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 VN1R17PQ8TDU5 208 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 TMEM190Q8WZ59 177 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 MBD6Q96DN6 1003 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 SGK494Q96LW2 274 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 HIST1H2BLQ99880 126 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
RAB3IP-216ENST00000552199 OR2T8A6NH00 312 aa10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 MRPS12O15235 138 aaKnown RBP10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 SCGB2A1O75556 95 aa10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 CTSGP08311 255 aa10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 CBLN1P23435 193 aa10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 ADMP35318 185 aa10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 RPL19P84098 196 aaKnown RBP10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 ECSCRQ19T08 205 aa10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 EXOC3-AS1Q8N2X6 119 aa10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 BBC3Q96PG8 261 aaPredicted RBP10.96□□□□□ -0.65
RAB3IP-216ENST00000552199 USP9XQ93008 2570 aaPredicted RBP10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 TRBV9A0A0B4J1U6 114 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 FRMD6-AS1P0C7T7 363 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 IER3P46695 156 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 TCL1AP56279 114 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 PYY3Q5JQD4 70 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 GRAMD2BQ96HH9 432 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 C17orf77Q96MU5 243 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 CHRDL1Q9BU40 450 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 GNB1LQ9BYB4 327 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 MRPL18Q9H0U6 180 aaKnown RBP10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 MEGF9Q9H1U4 602 aa10.96□□□□□ -0.66
RAB3IP-216ENST00000552199 TRAV40A0A0B4J280 105 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms