RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 M0R129 80 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 MFNGO00587 321 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 CCSO14618 274 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 OGG1O15527 345 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 PSCAO43653 123 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 ZNF324O75467 553 aaPredicted RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM50AO95807 157 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 FAM107AO95990 144 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 INSP01308 110 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 FCER2P06734 321 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 CRYGDP07320 174 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 FCGR3AP08637 254 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 NQO2P16083 231 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 PRDX6P30041 224 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 NUP62P37198 522 aaPredicted RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 RPL5P46777 297 aaKnown RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 NPBWR1P48145 328 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 DAPP51397 102 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM50BP56557 158 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 YPEL3P61236 119 aaPredicted RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 CNBPP62633 177 aaKnown RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 SLAQ13239 276 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 OR5I1Q13606 314 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 MRPL23Q16540 153 aaKnown RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 Q499Y3 187 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 XAF1Q6GPH4 301 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 SLC25A24Q6NUK1 477 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 RPL22L1Q6P5R6 122 aaKnown RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 NEGR1Q7Z3B1 354 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM144Q7Z5S9 345 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 GPR141Q7Z602 305 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 MS4A15Q8N5U1 240 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 UBAC2Q8NBM4 344 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 OR1L8Q8NGR8 309 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 OR52E5Q8NH55 327 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TRUB1Q8WWH5 349 aaKnown RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 SMIM19Q96E16 107 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 RNF185Q96GF1 192 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 NARS2Q96I59 477 aaKnown RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 GFI1Q99684 422 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 C7orf50Q9BRJ6 194 aaKnown RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 HDHD3Q9BSH5 251 aaPredicted RBP1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM59Q9BXS4 323 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 GABARAPL3Q9BY60 117 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 LPAR5Q9H1C0 372 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TMBIM4Q9HC24 238 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 PLEKHJ1Q9NW61 149 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 COMMD9Q9P000 198 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 DOK5Q9P104 306 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 CKLFQ9UBR5 152 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 CLEC2DQ9UHP7 191 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 AK3Q9UIJ7 227 aa1.41□□□□□ -2.18
PTCH1-223ENST00000551623 TRAV30A0A087WSZ9 112 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 IGKV1D-13A0A0B4J2D9 117 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 IGHV3-38A0A0C4DH36 116 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 IGHV3-66A0A0C4DH42 116 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 C9JCJ5 164 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 BOLA2-SMG1P6H3BVE0 249 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 H7BYZ3 331 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 J3QLW9 94 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 BET1O15155 118 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 ATP8B1O43520 1251 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 GSTZ1O43708 216 aaPredicted RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 CLN5O75503 358 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 MT-CO2P00403 227 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 HPRT1P00492 218 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PRM2P04554 102 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 HOXB5P09067 269 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 CD3GP09693 182 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 IGLC1P0CG04 106 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 LIMS3P0CW19 117 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 LIMS4P0CW20 117 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 IGKV1-13P0DP09 117 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF19P17023 458 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 ANXA7P20073 488 aaKnown RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PRKACGP22612 351 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PSMB9P28065 219 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 ATP6V1E1P36543 226 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 HSPA13P48723 471 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 MEOX2P50222 304 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PPP5CP53041 499 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 FXYD7P58549 80 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PRCDQ00LT1 54 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 SRSF9Q13242 221 aaKnown RBP eCLIP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 SPCS2Q15005 226 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 P2RY14Q15391 338 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 BSXQ3C1V8 233 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 LINC01620Q4KN68 170 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 C1orf194Q5T5A4 169 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 MEDAGQ5VYS4 303 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 OR8G2PQ6IF36 304 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 REG3GQ6UW15 175 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 ATRAIDQ6UW56 229 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 SIGLEC15Q6ZMC9 328 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 IQCF2Q8IXL9 164 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 HS3ST5Q8IZT8 346 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 JAGN1Q8N5M9 183 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 Q8N976 141 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 OR11H7Q8NGC8 314 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 OR6F1Q8NGZ6 308 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms