RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 TERB2Q8NHR7 220 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 OR5P2Q8WZ92 322 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 MS4A6EQ96DS6 147 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 SMIM12Q96EX1 92 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 C14orf144Q96I85 54 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 PHB2Q99623 299 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 APOL4Q9BPW4 351 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 GSKIPQ9P0R6 139 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 SCP2D1Q9UJQ7 156 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 C14orf166Q9Y224 244 aaKnown RBP2.41□□□□□ -2.02
LIMA1-205ENST00000550592 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.41□□□□□ -2.02
LIMA1-205ENST00000550592 R4GN34 69 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 HUWE1Q7Z6Z7 4374 aaKnown RBP2.41□□□□□ -2.02
LIMA1-205ENST00000550592 ALMS1Q8TCU4 4167 aa2.41□□□□□ -2.02
LIMA1-205ENST00000550592 KMT2AQ03164 3969 aa2.4□□□□□ -2.02
LIMA1-205ENST00000550592 A0A1W2PNN7 141 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 C9orf170A2RU37 121 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 OR51F1A6NGY5 319 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 C15orf65H3BRN8 121 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 J3QRK9 145 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 TPST1O60507 370 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 ENTPD6O75354 484 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 MRPL33O75394 65 aaKnown RBP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 FADS2O95864 444 aaKnown RBP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 P0C880 135 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 SLC35E2BP0CK96 405 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 SCGB1C2P0DMR2 95 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 SCGB1A1P11684 91 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 HRES1P13985 223 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 RPS3P23396 243 aaKnown RBP eCLIP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 CNTFRP26992 372 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 ELK4P28324 431 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 RAB5CP51148 216 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 TMBIM6P55061 237 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 UBE2KP61086 200 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 CCL8P80075 99 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 RPL19P84098 196 aaKnown RBP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 CD164Q04900 197 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 RAB31Q13636 194 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 CEACAM21Q3KPI0 293 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 RASSF6Q6ZTQ3 369 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 TMED4Q7Z7H5 227 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 C8orf59Q8N0T1 100 aaPredicted RBP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 C3orf22Q8N5N4 141 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 EIF4E3Q8N5X7 224 aaKnown RBP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 PACRGLQ8N7B6 248 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 OR51D1Q8NGF3 324 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 OR13D1Q8NGV5 346 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 OR5J2Q8NH18 312 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 ACTL9Q8TC94 416 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 DYNC2LI1Q8TCX1 351 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 SCGB1C1Q8TD33 95 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 MAGOHBQ96A72 148 aaKnown RBP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 NIPSNAP1Q9BPW8 284 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 DCUN1D5Q9BTE7 237 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 GGACTQ9BVM4 153 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF436Q9C0F3 470 aaPredicted RBP2.4□□□□□ -2.03
LIMA1-205ENST00000550592 AICDAQ9GZX7 198 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 SLC25A31Q9H0C2 315 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 CXorf21Q9HAI6 301 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 TAS2R9Q9NYW1 312 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 SLC22A13Q9Y226 551 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 TRAPPC1Q9Y5R8 145 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 DNAH10Q8IVF4 4471 aa2.4□□□□□ -2.03
LIMA1-205ENST00000550592 IGHV3-21A0A0B4J1V1 117 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 TCRBV4S1A1TA0A5B7 111 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 C1orf196B1AJZ1 125 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 K7ERS5 55 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 M0R143 59 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 UBDO15205 165 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 CRXO43186 299 aaPredicted RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 TGOLN2O43493 480 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 SSNA1O43805 119 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 GPR75O95800 540 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 SERPINA1P01009 418 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 IGHV1-69P01742 117 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 PPBPP02775 128 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 PET100P0DJ07 73 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 MPC1LP0DKB6 136 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 GTF2F2P13984 249 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 PVALBP20472 110 aaPredicted RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 CD34P28906 385 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 S100A2P29034 98 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 DDTP30046 118 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 TSPOP30536 169 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 S100A11P31949 105 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 FGF12P61328 243 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 MRPS10P82664 201 aaKnown RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 APOFQ13790 326 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 OR4D1Q15615 310 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 NNATQ16517 81 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM176BQ3YBM2 270 aaPredicted RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM155Q4W5P6 130 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 ACSBG2Q5FVE4 666 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 CLLU1Q5K131 121 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 RBM48Q5RL73 367 aaKnown RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF660Q6AZW8 331 aaPredicted RBP2.39□□□□□ -2.03
LIMA1-205ENST00000550592 AGTRAPQ6RW13 159 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 AHSA2Q719I0 299 aa2.39□□□□□ -2.03
LIMA1-205ENST00000550592 SSX7Q7RTT5 188 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms