RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, human

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC1-206	ENST00000550558	MFAP4	P55083	255 aa		13.59	□□□□□ -0.23
ASIC1-206	ENST00000550558		K7EN84	100 aa		13.59	□□□□□ -0.23
ASIC1-206	ENST00000550558		M0R143	59 aa		13.59	□□□□□ -0.23
ASIC1-206	ENST00000550558	NBR2	O15453	112 aa		13.59	□□□□□ -0.23
ASIC1-206	ENST00000550558	OR8A1	Q8NGG7	326 aa		13.59	□□□□□ -0.23
ASIC1-206	ENST00000550558	DDB2	Q92466	427 aa		13.59	□□□□□ -0.23
ASIC1-206	ENST00000550558	DCHS1	Q96JQ0	3298 aa		13.58	□□□□□ -0.23
ASIC1-206	ENST00000550558	ZZEF1	O43149	2961 aa		13.58	□□□□□ -0.23
ASIC1-206	ENST00000550558	SHISA9	B4DS77	424 aa		13.58	□□□□□ -0.23
ASIC1-206	ENST00000550558	CCDC144NL	Q6NUI1	221 aa		13.58	□□□□□ -0.23
ASIC1-206	ENST00000550558	MCRIP2	Q9BUT9	160 aa	Known RBP	13.58	□□□□□ -0.23
ASIC1-206	ENST00000550558		P0C879	139 aa		13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558	ARL3	P36405	182 aa		13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558	LCN12	Q6JVE5	192 aa		13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558		A1L4Q6	167 aa		13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558	RPL15	P61313	204 aa	Known RBP	13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558	ACTL10	Q5JWF8	245 aa		13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558	C1RL	Q9NZP8	487 aa		13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558	FBXL7	Q9UJT9	491 aa		13.58	□□□□□ -0.24
ASIC1-206	ENST00000550558	IFITM10	A6NMD0	228 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	MT-ND6	P03923	174 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	ZNF25	P17030	456 aa	Predicted RBP	13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	PPIF	P30405	207 aa	Known RBP	13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	TEX36	Q5VZQ5	186 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	CYB5R2	Q6BCY4	276 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	ZNF833P	Q6ZTB9	187 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	ZNF664	Q8N3J9	261 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	FAM168A	Q92567	244 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	GPR82	Q96P67	336 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	PKD1L2	Q7Z442	2459 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	ZNF138	P52744	262 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	TFPI2	P48307	235 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	C21orf62	Q9NYP8	219 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	LSM4	Q9Y4Z0	139 aa	Known RBP	13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	KALRN	O60229	2985 aa		13.57	□□□□□ -0.24
ASIC1-206	ENST00000550558	TCAP	O15273	167 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	NUPR1	O60356	82 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	OR5AL1	P0C617	328 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	S100A4	P26447	101 aa	Known RBP	13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	FOXL1	Q12952	345 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	SPATA45	Q537H7	98 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	TEX45	Q8NA69	505 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	ARPC1A	Q92747	370 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	AP1S3	Q96PC3	154 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	NRN1	Q9NPD7	142 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	MTOR	P42345	2549 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	C22orf46	C9J442	243 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	IGHV3-11	P01762	117 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	FAM106CP	P0CH98	169 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	PAFAH1B2	P68402	229 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	PRR20E	P86478	221 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	PRR20C	P86479	221 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	PRR20D	P86480	221 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	PRR20B	P86481	221 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	PRR20A	P86496	221 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	C11orf42	Q8N5U0	333 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	BRD3OS	Q6XYD6	125 aa		13.56	□□□□□ -0.24
ASIC1-206	ENST00000550558	SNAI2	O43623	268 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	RNF125	Q96EQ8	232 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	PF4V1	P10720	104 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	HINT1	P49773	126 aa	Predicted RBP	13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	CTAG1A	P78358	180 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	CLEC19A	Q6UXS0	136 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	CD99	P14209	185 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	CA7	P43166	264 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	ATP5I	P56385	69 aa	Predicted RBP	13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	CX3CL1	P78423	397 aa		13.55	□□□□□ -0.24
ASIC1-206	ENST00000550558	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	LAMA5	O15230	3695 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	HLA-DRB1	P01911	266 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	NHLH1	Q02575	133 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	REL	Q04864	619 aa	Predicted RBP	13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	SMIM15	Q7Z3B0	74 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	UNQ6494/PRO21346	Q6UXR6	183 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	ERAS	Q7Z444	233 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	REC114	Q7Z4M0	266 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	OSTC	Q9NRP0	149 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	CDC42EP3	Q9UKI2	254 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	ATP5J2	P56134	94 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	FXYD7	P58549	80 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	VWC2	Q2TAL6	325 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558		Q8TAT8	98 aa		13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.54	□□□□□ -0.24
ASIC1-206	ENST00000550558	HTN1	P15515	57 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	TWIST1	Q15672	202 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	VMO1	Q7Z5L0	202 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	SLC25A2	Q9BXI2	301 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	TMEM189	A5PLL7	270 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	ITGB1BP1	O14713	200 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	KLHDC1	Q8N7A1	406 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	F11R	Q9Y624	299 aa	Known RBP	13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	TACC2	O95359	2948 aa		13.53	□□□□□ -0.24
ASIC1-206	ENST00000550558	NACA	E9PAV3	2078 aa		13.52	□□□□□ -0.24
ASIC1-206	ENST00000550558	CGB3	P0DN86	165 aa		13.52	□□□□□ -0.24
ASIC1-206	ENST00000550558	CGB7	P0DN87	165 aa		13.52	□□□□□ -0.24
ASIC1-206	ENST00000550558	GNLY	P22749	145 aa		13.52	□□□□□ -0.24
ASIC1-206	ENST00000550558	NBL1	P41271	181 aa		13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms