RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 RTL8BQ17RB0 113 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 CCDC58Q4VC31 144 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 C1orf140Q5VVS0 124 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 Q6ZQT0 140 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 ZNF826PQ6ZT77 177 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 AAED1Q7RTV5 226 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 LRRC28Q86X40 367 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-208ENST00000549876 PRR15Q8IV56 129 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 IFT20Q8IY31 132 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 WFDC11Q8NEX6 87 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 OR4D11Q8NGI4 311 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 PPTC7Q8NI37 304 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 GPX7Q96SL4 187 aaPredicted RBP1.29□□□□□ -2.2
CCDC38-208ENST00000549876 TTTY12Q9BZ98 90 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 TMEM138Q9NPI0 162 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 GSKIPQ9P0R6 139 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 BCL9O00512 1426 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 CPAMD8Q8IZJ3 1885 aa1.29□□□□□ -2.2
CCDC38-208ENST00000549876 DOCK4Q8N1I0 1966 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 SORL1Q92673 2214 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TRAV36DV7A0A075B6V5 113 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 MEIKINA0A087WXM9 373 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TRAV5A0A0B4J249 113 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TRDV1A0A1B0GX56 115 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 IBA57-AS1B1ANH7 110 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TMEM256-PLSCR3K7ERE1 68 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 PMP2P02689 132 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 C1QCP02747 245 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 CRYGAP11844 174 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 NDUFA6P56556 154 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 MYL5Q02045 173 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 SLC38A11Q08AI6 406 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 EIF3IQ13347 325 aaKnown RBP1.28□□□□□ -2.2
CCDC38-208ENST00000549876 SPANXN5Q5MJ07 72 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 FKBP1CQ5VVH2 108 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 OR2T10Q8NGZ9 312 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 AQP3Q92482 292 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TSC22D3Q99576 134 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TXNDC17Q9BRA2 123 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 PRADC1Q9BSG0 188 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 MRPL32Q9BYC8 188 aaKnown RBP1.28□□□□□ -2.2
CCDC38-208ENST00000549876 YIPF3Q9GZM5 350 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TCEAL2Q9H3H9 227 aaPredicted RBP1.28□□□□□ -2.2
CCDC38-208ENST00000549876 TAS2R4Q9NYW5 299 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 MED31Q9Y3C7 131 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 LHFPL6Q9Y693 200 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 CD109Q6YHK3 1445 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 ERCC6Q03468 1493 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 NUP210LQ5VU65 1888 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 EML6Q6ZMW3 1958 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 MYO9BQ13459 2157 aa1.28□□□□□ -2.2
CCDC38-208ENST00000549876 NUP210Q8TEM1 1887 aaPredicted RBP1.27□□□□□ -2.21
CCDC38-208ENST00000549876 XIRP1Q702N8 1843 aaKnown RBP1.27□□□□□ -2.21
CCDC38-208ENST00000549876 PIK3C2AO00443 1686 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 RIMBP3CA6NJZ7 1639 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 RIMBP3BA6NNM3 1639 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 RIMBP3Q9UFD9 1639 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 DISP1Q96F81 1524 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 TECPR2O15040 1411 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 MED23Q9ULK4 1368 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 A0A087WX48 190 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 TMEM189A5PLL7 270 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 OVOL1O14753 267 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 NDUFB3O43676 98 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 OR2T1O43869 369 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 CST7O76096 145 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 AKR1C3P42330 323 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 INSL3P51460 131 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 DYNLT3P51808 116 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 DYNLT1P63172 113 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 TMEM155Q4W5P6 130 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 C3orf56Q8N813 242 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 C9orf163Q8N9P6 203 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 TMEM229BQ8NBD8 167 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 ST6GALNAC3Q8NDV1 305 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 SPACA4Q8TDM5 124 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 BORCS8Q96FH0 119 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 PFDN5Q99471 154 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 SLC25A21Q9BQT8 299 aaPredicted RBP1.27□□□□□ -2.21
CCDC38-208ENST00000549876 LINC00467Q9BRT7 94 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 LXNQ9BS40 222 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 OR2H1Q9GZK4 316 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 FAM107BQ9H098 131 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 POPDC3Q9HBV1 291 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 KIAA2026Q5HYC2 2103 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 HEATR5AQ86XA9 2040 aa1.27□□□□□ -2.21
CCDC38-208ENST00000549876 TAF1LQ8IZX4 1826 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 PXDNLA1KZ92 1463 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 TRAPPC8Q9Y2L5 1435 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 NCOA3Q9Y6Q9 1424 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 ZNF737O75373 536 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 IFNA4P05014 189 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 SCTP09683 121 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 BAALC-AS2P0C853 105 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 P0DMU3 169 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 FAM231AP0DMU4 169 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 FAM231CP0DMU5 169 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 COX4I1P13073 169 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 HLA-EP13747 358 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 MIFP14174 115 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms