RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 BMPR1BO00238 502 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 CRLF1O75462 422 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 BCL2P10415 239 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 PMS2P11Q13670 270 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 ICAM4Q14773 271 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 TOMM20LQ6UXN7 152 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 KLHDC1Q8N7A1 406 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-209ENST00000549308 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 ZFHX3Q15911 3703 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 H3BRN7 92 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 TCF21O43680 179 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 PAGE4O60829 102 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 TRBV12-3P01733 135 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 CD5P06127 495 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 UBE2G2P60604 165 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 FAM209BQ5JX69 171 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 FAM167A-AS1Q96KT0 104 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 SHANK2-AS3Q9BTD1 123 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 PAXXQ9BUH6 204 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 OR51M1Q9H341 326 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 C16orf95Q9H693 158 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 TMEM167BQ9NRX6 74 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 PEF1Q9UBV8 284 aaKnown RBP9.33□□□□□ -0.92
PTPRR-209ENST00000549308 VAX2Q9UIW0 290 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 HIVEP2P31629 2446 aa9.33□□□□□ -0.92
PTPRR-209ENST00000549308 ANK3Q12955 4377 aaKnown RBP9.32□□□□□ -0.92
PTPRR-209ENST00000549308 IGHV3OR16-8A0A075B7F1 116 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 KRBOX1C9JBD0 128 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 C9JQL5 133 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 OR10J4P0C629 311 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 S100A7P31151 101 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 TAGLN2P37802 199 aaKnown RBP9.32□□□□□ -0.92
PTPRR-209ENST00000549308 UBE2L3P68036 154 aaKnown RBP9.32□□□□□ -0.92
PTPRR-209ENST00000549308 KIAA0141Q14154 515 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-209ENST00000549308 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 STXBP6Q8NFX7 210 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 ZNF414Q96IQ9 312 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 SMDT1Q9H4I9 107 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 OTOGQ6ZRI0 2925 aa9.32□□□□□ -0.92
PTPRR-209ENST00000549308 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 GGCTO75223 188 aaKnown RBP9.31□□□□□ -0.92
PTPRR-209ENST00000549308 PYYP10082 97 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 CST9LP1Q5W188 147 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 MYOZ3Q8TDC0 251 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 LINC00052Q96N35 136 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 BAHCC1Q9P281 2608 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 ZNF98A6NK75 572 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 F8W036 122 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 NDUFA4O00483 81 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 NDUFA7O95182 113 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 HSPB1P04792 205 aaKnown RBP9.31□□□□□ -0.92
PTPRR-209ENST00000549308 LGALS1P09382 135 aaKnown RBP9.31□□□□□ -0.92
PTPRR-209ENST00000549308 SFTA3P0C7M3 94 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 ZP3P21754 424 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 CEBPGP53567 150 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 KHDC1LQ5JSQ8 128 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 UBE2E2Q96LR5 201 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 C20orf24Q9BUV8 137 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 RNF24Q9Y225 148 aa9.31□□□□□ -0.92
PTPRR-209ENST00000549308 ZNF207O43670 478 aaKnown RBP9.3□□□□□ -0.92
PTPRR-209ENST00000549308 SRP19P09132 144 aaKnown RBP9.3□□□□□ -0.92
PTPRR-209ENST00000549308 MEF2BQ02080 365 aaPredicted RBP9.3□□□□□ -0.92
PTPRR-209ENST00000549308 BPIFA4PQ86YQ2 179 aa9.3□□□□□ -0.92
PTPRR-209ENST00000549308 OR4F5Q8NH21 305 aa9.3□□□□□ -0.92
PTPRR-209ENST00000549308 LINC01006Q8NI28 216 aa9.3□□□□□ -0.92
PTPRR-209ENST00000549308 OR4F4Q96R69 305 aa9.3□□□□□ -0.92
PTPRR-209ENST00000549308 METTL26Q96S19 204 aa9.3□□□□□ -0.92
PTPRR-209ENST00000549308 SLC35B3Q9H1N7 401 aa9.3□□□□□ -0.92
PTPRR-209ENST00000549308 FAM74A7A6NL05 159 aa9.29□□□□□ -0.92
PTPRR-209ENST00000549308 C11orf94C9JXX5 98 aa9.29□□□□□ -0.92
PTPRR-209ENST00000549308 GP9P14770 177 aa9.29□□□□□ -0.92
PTPRR-209ENST00000549308 ATP5G3P48201 142 aa9.29□□□□□ -0.92
PTPRR-209ENST00000549308 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
PTPRR-209ENST00000549308 TMEM14CQ9P0S9 112 aa9.29□□□□□ -0.92
PTPRR-209ENST00000549308 YTHDF2Q9Y5A9 579 aaKnown RBP9.29□□□□□ -0.92
PTPRR-209ENST00000549308 ZNF320A2RRD8 509 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 HAX1O00165 279 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
PTPRR-209ENST00000549308 NPPCP23582 126 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 CD81P60033 236 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 SRSF2Q01130 221 aaKnown RBP9.28□□□□□ -0.92
PTPRR-209ENST00000549308 RPEL1Q2QD12 228 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 FAM106AQ4KMX7 169 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 SUN5Q8TC36 379 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 TXNDC17Q9BRA2 123 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 ARL2-SNX15V9GYD0 113 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 MXRA5Q9NR99 2828 aa9.28□□□□□ -0.92
PTPRR-209ENST00000549308 CLPSL1A2RUU4 121 aa9.27□□□□□ -0.92
PTPRR-209ENST00000549308 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.92
PTPRR-209ENST00000549308 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.92
PTPRR-209ENST00000549308 ADCYAP1P18509 176 aa9.27□□□□□ -0.92
PTPRR-209ENST00000549308 CDX1P47902 265 aaPredicted RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms