RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 STHQ8IWL8 128 aa8.8□□□□□ -1
DDX54-206ENST00000549271 STXBP6Q8NFX7 210 aa8.8□□□□□ -1
DDX54-206ENST00000549271 OR51G1Q8NGK1 321 aa8.8□□□□□ -1
DDX54-206ENST00000549271 OR4D5Q8NGN0 318 aa8.8□□□□□ -1
DDX54-206ENST00000549271 DCANP1Q8TF63 244 aa8.8□□□□□ -1
DDX54-206ENST00000549271 NARS2Q96I59 477 aaKnown RBP8.8□□□□□ -1
DDX54-206ENST00000549271 SLC35E1Q96K37 410 aa8.8□□□□□ -1
DDX54-206ENST00000549271 CIB3Q96Q77 187 aaPredicted RBP8.8□□□□□ -1
DDX54-206ENST00000549271 RABAC1Q9UI14 185 aa8.8□□□□□ -1
DDX54-206ENST00000549271 LYRM1O43325 122 aa8.79□□□□□ -1
DDX54-206ENST00000549271 MIFP14174 115 aa8.79□□□□□ -1
DDX54-206ENST00000549271 POLR2GP62487 172 aaKnown RBP eCLIP8.79□□□□□ -1
DDX54-206ENST00000549271 CNPY1Q3B7I2 92 aa8.79□□□□□ -1
DDX54-206ENST00000549271 Q6ZR54 194 aa8.79□□□□□ -1
DDX54-206ENST00000549271 THAP8Q8NA92 274 aa8.79□□□□□ -1
DDX54-206ENST00000549271 COQ8AQ8NI60 647 aa8.79□□□□□ -1
DDX54-206ENST00000549271 RNF126Q9BV68 326 aa8.79□□□□□ -1
DDX54-206ENST00000549271 PAIP2BQ9ULR5 123 aaKnown RBP8.79□□□□□ -1
DDX54-206ENST00000549271 HELTA6NFD8 242 aa8.78□□□□□ -1
DDX54-206ENST00000549271 A6NHS1 94 aa8.78□□□□□ -1
DDX54-206ENST00000549271 ZFP92A6NM28 416 aa8.78□□□□□ -1
DDX54-206ENST00000549271 RBMY1A1P0DJD3 496 aaKnown RBP8.78□□□□□ -1
DDX54-206ENST00000549271 RBMY1CP0DJD4 496 aa8.78□□□□□ -1
DDX54-206ENST00000549271 P0DMU3 169 aa8.78□□□□□ -1
DDX54-206ENST00000549271 FAM231AP0DMU4 169 aa8.78□□□□□ -1
DDX54-206ENST00000549271 FAM231CP0DMU5 169 aa8.78□□□□□ -1
DDX54-206ENST00000549271 PAX9P55771 341 aa8.78□□□□□ -1
DDX54-206ENST00000549271 RBMY1FQ15415 496 aaKnown RBP8.78□□□□□ -1
DDX54-206ENST00000549271 C4orf46Q504U0 113 aa8.78□□□□□ -1
DDX54-206ENST00000549271 SPANXN5Q5MJ07 72 aa8.78□□□□□ -1
DDX54-206ENST00000549271 MITD1Q8WV92 249 aa8.78□□□□□ -1
DDX54-206ENST00000549271 RNF125Q96EQ8 232 aa8.78□□□□□ -1
DDX54-206ENST00000549271 TRGV9Q99603 122 aa8.78□□□□□ -1
DDX54-206ENST00000549271 SCRT2Q9NQ03 307 aa8.78□□□□□ -1
DDX54-206ENST00000549271 TRAV10A0A0B4J240 114 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 IGHV4-28A0A0C4DH34 117 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 PMS2P5A8MQ11 134 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 C16orf90A8MZG2 172 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 H3BP45 60 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 IFNA21P01568 189 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 TCRBP04435 133 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 ZNF688P0C7X2 276 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 NKX2-1P43699 371 aaPredicted RBP8.77□□□□□ -1.01
DDX54-206ENST00000549271 EIF2B2P49770 351 aaKnown RBP8.77□□□□□ -1.01
DDX54-206ENST00000549271 AP2S1P53680 142 aaPredicted RBP8.77□□□□□ -1.01
DDX54-206ENST00000549271 RPP30P78346 268 aaKnown RBP8.77□□□□□ -1.01
DDX54-206ENST00000549271 OR2F1Q13607 317 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 LINC00299Q6ZSB3 139 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 CSNK1G2-AS1Q8NCQ2 148 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 SMIM8Q96KF7 97 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 C20orf85Q9H1P6 137 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 STRAPQ9Y3F4 350 aaKnown RBP8.77□□□□□ -1.01
DDX54-206ENST00000549271 X6R8D5 127 aa8.77□□□□□ -1.01
DDX54-206ENST00000549271 KNCNA6PVL3 124 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 SNRPGP15A8MWD9 76 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 AMBPP02760 352 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 C4BPBP20851 252 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 HLA-DMBP28068 263 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 IAH1Q2TAA2 248 aaPredicted RBP8.76□□□□□ -1.01
DDX54-206ENST00000549271 OR8G2PQ6IF36 304 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 SIGLEC15Q6ZMC9 328 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 TMEM182Q6ZP80 229 aaPredicted RBP8.76□□□□□ -1.01
DDX54-206ENST00000549271 Q6ZTC4 211 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 ZBTB8BQ8NAP8 495 aaPredicted RBP8.76□□□□□ -1.01
DDX54-206ENST00000549271 CCDC32Q9BV29 185 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 PBDC1Q9BVG4 233 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 SEPSECSQ9HD40 501 aaKnown RBP8.76□□□□□ -1.01
DDX54-206ENST00000549271 PSENENQ9NZ42 101 aa8.76□□□□□ -1.01
DDX54-206ENST00000549271 TRAV6A0A075B6T7 132 aa8.75□□□□□ -1.01
DDX54-206ENST00000549271 CCNKO75909 580 aa8.75□□□□□ -1.01
DDX54-206ENST00000549271 LYZP61626 148 aa8.75□□□□□ -1.01
DDX54-206ENST00000549271 SOHLH1Q5JUK2 328 aa8.75□□□□□ -1.01
DDX54-206ENST00000549271 RAB40CQ96S21 281 aa8.75□□□□□ -1.01
DDX54-206ENST00000549271 NRN1Q9NPD7 142 aa8.75□□□□□ -1.01
DDX54-206ENST00000549271 TBC1D24Q9ULP9 559 aa8.75□□□□□ -1.01
DDX54-206ENST00000549271 ELOA3CA0A087WX78 387 aaPredicted RBP8.74□□□□□ -1.01
DDX54-206ENST00000549271 SSSCA1O60232 199 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
DDX54-206ENST00000549271 FABP1P07148 127 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 GATA2P23769 480 aaPredicted RBP8.74□□□□□ -1.01
DDX54-206ENST00000549271 PSMG4Q5JS54 123 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 ACTL10Q5JWF8 245 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 C1orf194Q5T5A4 169 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 TMEM14EPQ6UXP3 125 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 ACOT7LQ6ZUV0 252 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 TMEM144Q7Z5S9 345 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 SEC22CQ9BRL7 303 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 NUDT15Q9NV35 164 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 GSKIPQ9P0R6 139 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 RCL1Q9Y2P8 373 aaKnown RBP8.74□□□□□ -1.01
DDX54-206ENST00000549271 MYCBP2O75592 4640 aa8.74□□□□□ -1.01
DDX54-206ENST00000549271 CCSO14618 274 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 CFDP00746 253 aaPredicted RBP8.73□□□□□ -1.01
DDX54-206ENST00000549271 H2AFB2P0C5Z0 115 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 NUP62P37198 522 aaPredicted RBP8.73□□□□□ -1.01
DDX54-206ENST00000549271 TAS2R30P59541 319 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 GSG1LQ6UXU4 331 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 ZNF431Q8TF32 576 aaPredicted RBP8.73□□□□□ -1.01
DDX54-206ENST00000549271 S100ZQ8WXG8 99 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 C17orf77Q96MU5 243 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms