RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PSMB2P49721 201 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 BAXQ07812 192 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 TSPAN31Q12999 210 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 EDDM3AQ14507 147 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 GRK1Q15835 563 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 RGS21Q2M5E4 152 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 ZFAND6Q6FIF0 208 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 SLC35E3Q7Z769 313 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 DYNAPQ8N1N2 210 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 THEM6Q8WUY1 208 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 MED12Q93074 2177 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 YIPF6Q96EC8 236 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 MRAP2Q96G30 205 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 METTL26Q96S19 204 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 HOPXQ9BPY8 73 aaPredicted RBP2.21□□□□□ -2.06
PTCH1-216ENST00000548379 PARD6GQ9BYG4 376 aaPredicted RBP2.21□□□□□ -2.06
PTCH1-216ENST00000548379 MROQ9BYG7 248 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 TMEM133Q9H2Q1 129 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 OR51I2Q9H344 312 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 RAB22AQ9UL26 194 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 AMMECR1Q9Y4X0 333 aaPredicted RBP2.21□□□□□ -2.06
PTCH1-216ENST00000548379 LRRC42Q9Y546 428 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 LINC00312Q9Y6C7 94 aa2.21□□□□□ -2.06
PTCH1-216ENST00000548379 FREM1Q5H8C1 2179 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 FREM3P0C091 2139 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 EXPH5Q8NEV8 1989 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 TMEM269A0A1B0GVZ9 245 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 ARRDC5A6NEK1 342 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 BUB1B-PAK6H3BSN5 160 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 NOS1APO75052 506 aaPredicted RBP2.2□□□□□ -2.06
PTCH1-216ENST00000548379 GATBO75879 557 aaKnown RBP2.2□□□□□ -2.06
PTCH1-216ENST00000548379 GYPBP06028 91 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 SPI1P17947 270 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 PVALBP20472 110 aaPredicted RBP2.2□□□□□ -2.06
PTCH1-216ENST00000548379 CD24P25063 80 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 TSPOP30536 169 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 FXYD6P3P58550 94 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 CDC42P60953 191 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 KLHL12Q53G59 568 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 DNLZQ5SXM8 178 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 CLVS2Q5SYC1 327 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 GLYATQ6IB77 296 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 CLEC19AQ6UXS0 136 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 SBSPONQ8IVN8 264 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 SGPP2Q8IWX5 399 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 Q8IYB0 196 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 OR8B12Q8NGG6 310 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 TEX47Q8TBZ9 253 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 BLNKQ8WV28 456 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 RNF133Q8WVZ7 376 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 ASB17Q8WXJ9 295 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 TLCD1Q96CP7 247 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 CMTM5Q96DZ9 223 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 PYURFQ96I23 114 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 CEP19Q96LK0 163 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 TMEM56Q96MV1 263 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 TSSK6Q9BXA6 273 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 OR51V1Q9H2C8 321 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 EFCAB1Q9HAE3 211 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 DIABLOQ9NR28 239 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 ROS1P08922 2347 aa2.2□□□□□ -2.06
PTCH1-216ENST00000548379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.2□□□□□ -2.06
PTCH1-216ENST00000548379 VWFP04275 2813 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 IGHV6-1A0A0B4J1U7 121 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 RBFOX3A6NFN3 312 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 FXYD1O00168 92 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 CCRL2O00421 344 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 HPGDSO60760 199 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 CCDC22O60826 627 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 EDF1O60869 148 aaKnown RBP2.19□□□□□ -2.06
PTCH1-216ENST00000548379 DHRS3O75911 302 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 CDRT1O95170 752 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 HAND1O96004 215 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 HLA-AP01891 365 aaKnown RBP2.19□□□□□ -2.06
PTCH1-216ENST00000548379 RLN2P04090 185 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 CDK2P24941 298 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 NFYBP25208 207 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 IL3RAP26951 378 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 ERP29P30040 261 aaKnown RBP2.19□□□□□ -2.06
PTCH1-216ENST00000548379 DLX6P56179 175 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 CMC4P56277 68 aaPredicted RBP2.19□□□□□ -2.06
PTCH1-216ENST00000548379 PMVKQ15126 192 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 HLA-DRB5Q30154 266 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 SPIN3Q5JUX0 258 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 BCL2L15Q5TBC7 163 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 C10orf99Q6UWK7 81 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 HEPN1Q6WQI6 88 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 RASSF6Q6ZTQ3 369 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 C5orf56Q8N8D9 126 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 OR11H1Q8NG94 326 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 OR4P4Q8NGL7 312 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 OR10X1Q8NGY0 326 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 OTOSQ8NHW6 89 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 HAVCR2Q8TDQ0 301 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 C4orf3Q8WVX3 66 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 RMI2Q96E14 147 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 BORCS8Q96FH0 119 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 PGLYRP3Q96LB9 341 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 OR4C12Q96R67 309 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms