RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 AVPP01185 164 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 IGHV3-23P01764 117 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 IL4P05112 153 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 S100A6P06703 90 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 COL8A1P27658 744 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 TMEM68Q96MH6 324 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 CDC42EP3Q9UKI2 254 aa16.38■□□□□ 0.21
RITA1-201ENST00000548278 MAP1AP78559 2803 aaPredicted RBP16.37■□□□□ 0.21
RITA1-201ENST00000548278 A0A1W2PPQ1 181 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 IGLV2-8P01709 118 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 GATA3P23771 443 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 TAS2R60P59551 318 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 KRTAP10-9P60411 292 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 KCNIP4Q6PIL6 250 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 VN1R17PQ8TDU5 208 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 LINC00479Q96M42 142 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 TXN2Q99757 166 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 SRD5A3Q9H8P0 318 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 CELSR1Q9NYQ6 3014 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 CSMD2Q7Z408 3487 aa16.37■□□□□ 0.21
RITA1-201ENST00000548278 G3V318 75 aa16.36■□□□□ 0.21
RITA1-201ENST00000548278 PHOX2AO14813 284 aa16.36■□□□□ 0.21
RITA1-201ENST00000548278 OR5I1Q13606 314 aa16.36■□□□□ 0.21
RITA1-201ENST00000548278 PTPN13Q12923 2485 aa16.36■□□□□ 0.21
RITA1-201ENST00000548278 TRBV9A0A0B4J1U6 114 aa16.36■□□□□ 0.21
RITA1-201ENST00000548278 FAM3BP58499 235 aaPredicted RBP16.36■□□□□ 0.21
RITA1-201ENST00000548278 FOXL1Q12952 345 aa16.36■□□□□ 0.21
RITA1-201ENST00000548278 EPDR1Q9UM22 224 aa16.36■□□□□ 0.21
RITA1-201ENST00000548278 POLQO75417 2590 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 ZFHX3Q15911 3703 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 PGPA6NDG6 321 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 OR2T8A6NH00 312 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 CTSGP08311 255 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H1EP10412 219 aaKnown RBP16.35■□□□□ 0.21
RITA1-201ENST00000548278 CNN1P51911 297 aaKnown RBP16.35■□□□□ 0.21
RITA1-201ENST00000548278 GNG5P63218 68 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 USF2Q15853 346 aaPredicted RBP16.35■□□□□ 0.21
RITA1-201ENST00000548278 LINC01356Q8N9X3 169 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 ZNF586Q9NXT0 402 aa16.35■□□□□ 0.21
RITA1-201ENST00000548278 H3BTX0 84 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 GCGP01275 180 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 RHOGP84095 191 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 BCL6BQ8N143 479 aaPredicted RBP16.34■□□□□ 0.21
RITA1-201ENST00000548278 PPP5D1E7EU14 171 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 AP4M1O00189 453 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 UBE2CO00762 179 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 TYMSP04818 313 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 SLC25A5P05141 298 aaKnown RBP16.34■□□□□ 0.21
RITA1-201ENST00000548278 S100A12P80511 92 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 C15orf32Q32M92 178 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 ZNF502Q8TBZ5 544 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 Q9H3A6 140 aa16.34■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BKO60814 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BJP06899 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BOP23527 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BBP33778 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BDP58876 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BCP62807 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST2H2BEQ16778 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BHQ93079 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BNQ99877 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 HIST1H2BMQ99879 126 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 CHRDL1Q9BU40 450 aa16.33■□□□□ 0.21
RITA1-201ENST00000548278 USP9YO00507 2555 aaPredicted RBP16.33■□□□□ 0.21
RITA1-201ENST00000548278 TRAV34A0A0B4J273 112 aa16.33■□□□□ 0.2
RITA1-201ENST00000548278 A6NDX4 124 aa16.33■□□□□ 0.2
RITA1-201ENST00000548278 ADMP35318 185 aa16.33■□□□□ 0.2
RITA1-201ENST00000548278 ERVFC1-1P60608 527 aa16.33■□□□□ 0.2
RITA1-201ENST00000548278 C19orf54Q5BKX5 351 aa16.33■□□□□ 0.2
RITA1-201ENST00000548278 BPIFA4PQ86YQ2 179 aa16.33■□□□□ 0.2
RITA1-201ENST00000548278 FRZBQ92765 325 aa16.33■□□□□ 0.2
RITA1-201ENST00000548278 CENPEQ02224 2701 aa16.32■□□□□ 0.2
RITA1-201ENST00000548278 H3BUX3 64 aa16.32■□□□□ 0.2
RITA1-201ENST00000548278 SLC17A3O00476 420 aa16.32■□□□□ 0.2
RITA1-201ENST00000548278 ISLRO14498 428 aa16.32■□□□□ 0.2
RITA1-201ENST00000548278 MRPS12O15235 138 aaKnown RBP16.32■□□□□ 0.2
RITA1-201ENST00000548278 CRIP2P52943 208 aaPredicted RBP16.32■□□□□ 0.2
RITA1-201ENST00000548278 C5orf17Q8NAS9 161 aa16.32■□□□□ 0.2
RITA1-201ENST00000548278 KLF12Q9Y4X4 402 aa16.32■□□□□ 0.2
RITA1-201ENST00000548278 V9GYV3 84 aa16.32■□□□□ 0.2
RITA1-201ENST00000548278 ZNF98A6NK75 572 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 SCGB2A1O75556 95 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 IGLC2P0DOY2 106 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 FABP9Q0Z7S8 132 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 TMEM183BQ1AE95 376 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 OTORQ9NRC9 128 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 OSTCQ9NRP0 149 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 IL36BQ9NZH7 164 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 LY6EQ16553 131 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 S100A7AQ86SG5 101 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 ZNF414Q96IQ9 312 aa16.31■□□□□ 0.2
RITA1-201ENST00000548278 TRGC1P0CF51 173 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 BAGE2Q86Y30 109 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 ATG101Q9BSB4 218 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 RNASE7Q9H1E1 156 aaKnown RBP16.3■□□□□ 0.2
RITA1-201ENST00000548278 BEX4Q9NWD9 120 aaPredicted RBP16.3■□□□□ 0.2
RITA1-201ENST00000548278 TRBV19A0A075B6N1 114 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 TRAV41A0A0B4J266 112 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 AKR1D1P51857 326 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms