RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PIGBOS1A0A0B4J2F0 54 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 LINC00854A0A1B0GVQ3 168 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 ZNF705EA8MWA4 302 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-211ENST00000547950 H3BMM0 161 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 WRBO00258 174 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 PITX3O75364 302 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 MED6O75586 246 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 FABP1P07148 127 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 HOXB5P09067 269 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 FXYD7P58549 80 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 LINC00310P59036 64 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 DEFB1P60022 68 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 ZNF767PQ75MW2 155 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 CSNK1G2-AS1Q8NCQ2 148 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 TRIM63Q969Q1 353 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 LYSTQ99698 3801 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 SLC25A21Q9BQT8 299 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-211ENST00000547950 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 WDR12Q9GZL7 423 aaKnown RBP4.85□□□□□ -1.63
SCAF11-211ENST00000547950 X6R8D5 127 aa4.85□□□□□ -1.63
SCAF11-211ENST00000547950 IGHV3OR16-12A0A075B7B8 117 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 DUXBA0A1W2PPF3 345 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 C11orf94C9JXX5 98 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 SYNGR2O43760 224 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 SFT2D2O95562 160 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 MED14OSP0DP75 135 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 ID1P41134 155 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 NKX2-1P43699 371 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-211ENST00000547950 EMP1P54849 157 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 RPP30P78346 268 aaKnown RBP4.84□□□□□ -1.63
SCAF11-211ENST00000547950 PPP1R1AQ13522 171 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 ZNF79Q15937 498 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 SPANXN5Q5MJ07 72 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 GDF5OSQ5U4N7 250 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 GGNBP1Q5YKI7 109 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 OR8G2PQ6IF36 304 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 Q6ZTC4 211 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 OR8I2Q8N0Y5 310 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 LRTM2Q8N967 370 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 OR4B1Q8NGF8 309 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 COQ8AQ8NI60 647 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 C1QTNF4Q9BXJ3 329 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 HRH4Q9H3N8 390 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
SCAF11-211ENST00000547950 APLNQ9ULZ1 77 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 TMED3Q9Y3Q3 217 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 V9GYH0 126 aa4.84□□□□□ -1.63
SCAF11-211ENST00000547950 IGKV1OR2-108A0A075B7D4 117 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 TRAV10A0A0B4J240 114 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 F6UB75 175 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 H3BP45 60 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 SLC25A6P12236 298 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 HLA-DRB4P13762 266 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 ORM2P19652 201 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 GATA2P23769 480 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-211ENST00000547950 NUP62P37198 522 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-211ENST00000547950 INPP1P49441 399 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 TCTAP57738 103 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 C12orf74Q32Q52 190 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 SPANXN2Q5MJ10 180 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 C1orf194Q5T5A4 169 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-211ENST00000547950 CCDC190Q86UF4 302 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 C16orf92Q96LL3 132 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 CIB3Q96Q77 187 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-211ENST00000547950 TRGV9Q99603 122 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 RSG1Q9BU20 258 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 SAV1Q9H4B6 383 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-211ENST00000547950 SLC25A22Q9H936 323 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 CELA1Q9UNI1 258 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 STRAPQ9Y3F4 350 aaKnown RBP4.83□□□□□ -1.64
SCAF11-211ENST00000547950 HLA-DRB4X5D2U9 266 aa4.83□□□□□ -1.64
SCAF11-211ENST00000547950 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
SCAF11-211ENST00000547950 HYDINQ4G0P3 5121 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 IGHV4-4A0A075B6R2 117 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 DEFB131BA0A096LNP1 70 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 C9orf170A2RU37 121 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 SMCO3A2RU48 225 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 ZNF98A6NK75 572 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 ADAP1O75689 374 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 IFNA21P01568 189 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 SPART-AS1P0CW21 52 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 PSMB3P49720 205 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 POLR2GP62487 172 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCAF11-211ENST00000547950 PSG9Q00887 426 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 AKR1C1Q04828 323 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 FGL1Q08830 312 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 BAK1Q16611 211 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 TRIQKQ629K1 86 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 IGFL4Q6B9Z1 124 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 EBLN2Q6P2I7 272 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 THAP8Q8NA92 274 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 OR1B1Q8NGR6 318 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 DEDD2Q8WXF8 326 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 TMEM147Q9BVK8 224 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 KRTAP17-1Q9BYP8 105 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 SRRQ9GZT4 340 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 SLC35B3Q9H1N7 401 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 PSENENQ9NZ42 101 aa4.82□□□□□ -1.64
SCAF11-211ENST00000547950 DOK5Q9P104 306 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms