RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GPR31O00270 319 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 LY6HO94772 140 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 IGHV1-69P01742 117 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SMIM17P0DL12 118 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SMIM10L2AP0DMW4 78 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SMIM10L2BP0DMW5 78 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SPI1P17947 270 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 CRHBPP24387 322 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 TAS2R30P59541 319 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 NCALDP61601 193 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 LCN6P62502 163 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 AKR1C1Q04828 323 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 PP632Q6XCG6 107 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SSX8Q7RTT4 187 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SPATA12Q7Z6I5 190 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 ZNF283Q8N7M2 679 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SLC25A40Q8TBP6 338 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 GPR146Q96CH1 333 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SH3BGRL3Q9H299 93 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 EFCAB1Q9HAE3 211 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 TVP23BQ9NYZ1 205 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 ATG2BQ96BY7 2078 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 NIPBLQ6KC79 2804 aaeCLIP2.54□□□□□ -2
SCAF11-210ENST00000547654 PLXNA4Q9HCM2 1894 aa2.54□□□□□ -2
SCAF11-210ENST00000547654 AHCTF1Q8WYP5 2266 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 ICE1Q9Y2F5 2266 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 RFX7Q2KHR2 1363 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 IGKV2-28A0A075B6P5 120 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 TMEM150BA6NC51 233 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 DPRXA6NFQ7 191 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 COLCA2A8K830 154 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 TXNDC9O14530 226 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 IFNA14P01570 189 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 IGKV2D-28P01615 120 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 C1QBP02746 253 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 PRM2P04554 102 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 S100GP29377 79 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 BLVRBP30043 206 aaPredicted RBP2.53□□□□□ -2
SCAF11-210ENST00000547654 CD200P41217 278 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 RWDD2BP57060 319 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 RAB4BP61018 213 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 RHOBP62745 196 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 DHRS2Q13268 280 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 EBI3Q14213 229 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 RHEBQ15382 184 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 LGALS9BQ3B8N2 356 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 KPRPQ5T749 579 aaPredicted RBP2.53□□□□□ -2
SCAF11-210ENST00000547654 LGALS9CQ6DKI2 356 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 NOXRED1Q6NXP6 359 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 RPL22L1Q6P5R6 122 aaKnown RBP2.53□□□□□ -2
SCAF11-210ENST00000547654 Q6Q795 121 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 SDIM1Q6ZPB5 146 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 PHF13Q86YI8 300 aaPredicted RBP2.53□□□□□ -2
SCAF11-210ENST00000547654 FAM24BQ8N5W8 94 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 SLC7A6Q92536 515 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 RNASE6Q93091 150 aaKnown RBP2.53□□□□□ -2
SCAF11-210ENST00000547654 TOMM6Q96B49 74 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 ACER3Q9NUN7 267 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 ASF1BQ9NVP2 202 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 NDUFAF1Q9Y375 327 aa2.53□□□□□ -2
SCAF11-210ENST00000547654 ANKHD1Q8IWZ3 2542 aaKnown RBP2.52□□□□□ -2.01
SCAF11-210ENST00000547654 PTPRBP23467 1997 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 DLG5Q8TDM6 1919 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 PTPRJQ12913 1337 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 IGKV1D-37A0A075B6S9 117 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 LOC102725191A0A1B0GVB3 256 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 RPL36A-HNRNPH2H7BZ11 118 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 UBFD1O14562 309 aaKnown RBP2.52□□□□□ -2.01
SCAF11-210ENST00000547654 TP53I11O14683 189 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 IFNA10P01566 189 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 IFNA7P01567 189 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 LGALS1P09382 135 aaKnown RBP2.52□□□□□ -2.01
SCAF11-210ENST00000547654 CCL3P10147 92 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST1H2BOP23527 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST1H2BBP33778 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 GABRA4P48169 554 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 RBM11P57052 281 aaKnown RBP2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST1H2BDP58876 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 DEFA3P59666 94 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 AP1S1P61966 158 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST1H2BCP62807 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST2H2BEQ16778 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 SCGB2B2Q4G0G5 96 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.52□□□□□ -2.01
SCAF11-210ENST00000547654 LYRM7Q5U5X0 104 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 DCUN1D2Q6PH85 259 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 EIF4E3Q8N5X7 224 aaKnown RBP2.52□□□□□ -2.01
SCAF11-210ENST00000547654 ZNF709Q8N972 641 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 C12orf29Q8N999 325 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 CNEP1R1Q8N9A8 125 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 OR10K1Q8NGX5 313 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST1H2BHQ93079 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 C2orf50Q96LR7 162 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST1H2BNQ99877 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 HIST1H2BMQ99879 126 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 UPK3BQ9BT76 320 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 XAGE1AQ9HD64 81 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 MED29Q9NX70 200 aa2.52□□□□□ -2.01
SCAF11-210ENST00000547654 FUT9Q9Y231 359 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms