RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 STHQ8IWL8 128 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 USMG5Q96IX5 58 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 LINC00477Q96M19 166 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 IGKV1-6A0A0C4DH72 117 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 A0A1B0GV72 72 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 ZNF138P52744 262 aa10.22□□□□□ -0.77
COL4A6-209ENST00000545689 ZNF492Q9P255 531 aa10.21□□□□□ -0.77
COL4A6-209ENST00000545689 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-209ENST00000545689 GHRHP01286 108 aa10.21□□□□□ -0.77
COL4A6-209ENST00000545689 OR13C6PQ8NH95 151 aa10.21□□□□□ -0.77
COL4A6-209ENST00000545689 CD24P25063 80 aa10.21□□□□□ -0.78
COL4A6-209ENST00000545689 C10orf91Q5T1B1 145 aa10.21□□□□□ -0.78
COL4A6-209ENST00000545689 IGKV2-40A0A087WW87 121 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-209ENST00000545689 FAM231BA6NCW3 169 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 IGKV2D-40P01614 121 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-209ENST00000545689 ZNF474Q6S9Z5 364 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-209ENST00000545689 TMEM14BQ9NUH8 114 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 KIF26BQ2KJY2 2108 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 EMP1P54849 157 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 TCF20Q9UGU0 1960 aaKnown RBP10.2□□□□□ -0.78
COL4A6-209ENST00000545689 TRAV40A0A0B4J280 105 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 HOXA3O43365 443 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-209ENST00000545689 SH2D1AO60880 128 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 IGLV3-1P01715 115 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 EXOC3-AS1Q8N2X6 119 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 RSPO3Q9BXY4 272 aaPredicted RBP10.2□□□□□ -0.78
COL4A6-209ENST00000545689 COL4A6Q14031 1691 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 IGKV3OR2-268A0A0C4DH90 116 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 LY6G6EA0A0G2JKS1 128 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 GZMBP10144 247 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 LYZL1Q6UWQ5 148 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 PROK2Q9HC23 129 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 U3KQA8 63 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 HEATR5BQ9P2D3 2071 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 Q0VG73 95 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 CT83Q5H943 113 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
COL4A6-209ENST00000545689 NPIPB5A8MRT5 1133 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 D6R8Y8 96 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 SMAD7O15105 426 aaKnown RBP10.19□□□□□ -0.78
COL4A6-209ENST00000545689 Q86TA4 180 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 APOMO95445 188 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 PRB3Q04118 309 aaPredicted RBP10.19□□□□□ -0.78
COL4A6-209ENST00000545689 RFNGQ9Y644 331 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 FREM3P0C091 2139 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 TRGV2A0A075B6R0 118 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 NHP2Q9NX24 153 aaKnown RBP10.19□□□□□ -0.78
COL4A6-209ENST00000545689 ABCA7Q8IZY2 2146 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 PLNP26678 52 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 CACNA1IQ9P0X4 2223 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 THADAQ6YHU6 1953 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 TSPAN13O95857 204 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 TMEM75Q8N9X5 138 aa10.19□□□□□ -0.78
COL4A6-209ENST00000545689 CFAP161Q6P656 301 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 ZNF833PQ6ZTB9 187 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 DPH3P1Q9H4G8 78 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 TYMSP04818 313 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 IGFL3Q6UXB1 125 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 C5orf24Q7Z6I8 188 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 GLMPQ8WWB7 406 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 ZNF815PA8K554 130 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 EVI2AP22794 236 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 CD28P10747 220 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 PRTN3P24158 256 aa10.18□□□□□ -0.78
COL4A6-209ENST00000545689 C10orf126Q8N4M7 172 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 BRWD1Q9NSI6 2320 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 B4DSR2 109 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 RPL15P61313 204 aaKnown RBP10.17□□□□□ -0.78
COL4A6-209ENST00000545689 PTPRZ1P23471 2315 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-209ENST00000545689 LINC00311Q8N616 119 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 SPOCK3Q9BQ16 436 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 PAX9P55771 341 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 KLRD1Q13241 179 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 PYY3Q5JQD4 70 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 NDUFB8O95169 186 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 LCN12Q6JVE5 192 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 NDUFA4L2Q9NRX3 87 aa10.17□□□□□ -0.78
COL4A6-209ENST00000545689 YPEL3P61236 119 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-209ENST00000545689 TMEM256Q8N2U0 113 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 PLEKHB2Q96CS7 222 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 SYS1-DBNDD2H3BUS1 97 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 PPIFP30405 207 aaKnown RBP10.16□□□□□ -0.78
COL4A6-209ENST00000545689 OR2K2Q8NGT1 345 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 HS3ST6Q96QI5 342 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 TMEM238C9JI98 176 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 CFHR2P36980 270 aa10.16□□□□□ -0.78
COL4A6-209ENST00000545689 ARHGEF17Q96PE2 2063 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-209ENST00000545689 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-209ENST00000545689 RNASE1P07998 156 aaKnown RBP10.15□□□□□ -0.78
COL4A6-209ENST00000545689 TEX36Q5VZQ5 186 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 LYPD2Q6UXB3 125 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 TICRRQ7Z2Z1 1910 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 PFN1P07737 140 aaKnown RBP10.15□□□□□ -0.78
COL4A6-209ENST00000545689 ZNF479Q96JC4 524 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 TRBV7-9A0A0J9YWB2 115 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 NDUFS8O00217 210 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 VCYO14598 125 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms