RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SLC25A24Q6NUK1 477 aa10.77□□□□□ -0.69
CLSTN3-216ENST00000545663 LYZL2Q7Z4W2 148 aa10.77□□□□□ -0.69
CLSTN3-216ENST00000545663 C12orf45Q8N5I9 185 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-216ENST00000545663 ENY2Q9NPA8 101 aa10.77□□□□□ -0.69
CLSTN3-216ENST00000545663 CACNG5Q9UF02 275 aa10.77□□□□□ -0.69
CLSTN3-216ENST00000545663 A0A0B4J293 547 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 TEX50A0A1B0GTY4 177 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 INS-IGF2F8WCM5 200 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 ST8SIA3O43173 380 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 MED6O75586 246 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 ZNF688P0C7X2 276 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 ERHP84090 104 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 PRCDQ00LT1 54 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 Q56UQ5 140 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 NOXA1Q86UR1 476 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 GPR146Q96CH1 333 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 PGPEP1Q9NXJ5 209 aa10.76□□□□□ -0.69
CLSTN3-216ENST00000545663 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
CLSTN3-216ENST00000545663 HOXB5P09067 269 aa10.75□□□□□ -0.69
CLSTN3-216ENST00000545663 SUB1P53999 127 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLSTN3-216ENST00000545663 ATP5IP56385 69 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-216ENST00000545663 OR1S1Q8NH92 325 aa10.75□□□□□ -0.69
CLSTN3-216ENST00000545663 NSG2Q9Y328 171 aa10.75□□□□□ -0.69
CLSTN3-216ENST00000545663 DBX1A6NMT0 343 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 ICAM4Q14773 271 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 OXA1LQ15070 435 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 GGNBP1Q5YKI7 109 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 C15orf53Q8NAA6 179 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 CIB3Q96Q77 187 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 SEC22CQ9BRL7 303 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 HINT2Q9BX68 163 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 VSIRQ9H7M9 311 aa10.74□□□□□ -0.69
CLSTN3-216ENST00000545663 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 RPS10-NUDT3A0A1W2PQS6 291 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 C7orf66A4D0T2 115 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 K7EIM0 57 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 K7EQG2 157 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 NUDT3O95989 172 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 OR13C7P0DN81 318 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 SNCAP37840 140 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 CYCSP99999 105 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 WT1-ASQ06250 92 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 GSG1LQ6UXU4 331 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 ZNF705AQ6ZN79 300 aaPredicted RBP10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 RAB40CQ96S21 281 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 Q9H8V8 135 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 PRR13Q9NZ81 148 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 HSPB7Q9UBY9 170 aa10.73□□□□□ -0.69
CLSTN3-216ENST00000545663 IGHV3OR16-12A0A075B7B8 117 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 A0A0G2JRQ6 117 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 TMEM189A5PLL7 270 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 CORTO00230 105 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 SSNA1O43805 119 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 PITX3O75364 302 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 HOXA1P49639 335 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 RPP30P78346 268 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 ZNF114Q8NC26 417 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 OR1P1Q8NH06 330 aa10.72□□□□□ -0.69
CLSTN3-216ENST00000545663 C5orf51A6NDU8 294 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 CEBPZOSA8MTT3 80 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 ZNF705FA8MVS1 300 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 WRBO00258 174 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 ZNF705DP0CH99 300 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 ZNF705BP0CI00 300 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 HTR2BP41595 481 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 RELQ04864 619 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 IAH1Q2TAA2 248 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 ATP6V0BQ99437 205 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 NEU1Q99519 415 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 HEYLQ9NQ87 328 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 U3KQ87 197 aa10.71□□□□□ -0.69
CLSTN3-216ENST00000545663 FAT3Q8TDW7 4589 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 ADAP1O75689 374 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 IGHV3-48P01763 117 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 CD5P06127 495 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 NKX2-1P43699 371 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 CCL18P55774 89 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 TOMM20LQ6UXN7 152 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 ASB13Q8WXK3 278 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 C2orf50Q96LR7 162 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 F11RQ9Y624 299 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 RFNGQ9Y644 331 aa10.7□□□□□ -0.7
CLSTN3-216ENST00000545663 LRP2P98164 4655 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 FAM25EA8MYX2 175 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 FXYD7P58549 80 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 ID3Q02535 119 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 SSX7Q7RTT5 188 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 ZBTB8BQ8NAP8 495 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 DTD1Q8TEA8 209 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
CLSTN3-216ENST00000545663 SYNGR2O43760 224 aa10.68□□□□□ -0.7
CLSTN3-216ENST00000545663 PVALBP20472 110 aaPredicted RBP10.68□□□□□ -0.7
CLSTN3-216ENST00000545663 DAD1P61803 113 aa10.68□□□□□ -0.7
CLSTN3-216ENST00000545663 PSMG4Q5JS54 123 aa10.68□□□□□ -0.7
CLSTN3-216ENST00000545663 OR4D5Q8NGN0 318 aa10.68□□□□□ -0.7
CLSTN3-216ENST00000545663 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms