RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 STAG3L3P0CL85 134 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 ARL14EPLP0DKL9 152 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 CDX1P47902 265 aaPredicted RBP10.63□□□□□ -0.71
SCARB1-209ENST00000545305 USF2Q15853 346 aaPredicted RBP10.63□□□□□ -0.71
SCARB1-209ENST00000545305 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 WIPF2Q8TF74 440 aaPredicted RBP10.63□□□□□ -0.71
SCARB1-209ENST00000545305 MARC2Q969Z3 335 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 UHRF2Q96PU4 802 aa10.63□□□□□ -0.71
SCARB1-209ENST00000545305 MRPL27Q9P0M9 148 aaKnown RBP10.63□□□□□ -0.71
SCARB1-209ENST00000545305 OR7C2O60412 319 aa10.62□□□□□ -0.71
SCARB1-209ENST00000545305 PPT1P50897 306 aa10.62□□□□□ -0.71
SCARB1-209ENST00000545305 SRSF2Q01130 221 aaKnown RBP10.62□□□□□ -0.71
SCARB1-209ENST00000545305 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
SCARB1-209ENST00000545305 PQLC2Q6ZP29 291 aa10.62□□□□□ -0.71
SCARB1-209ENST00000545305 C4orf3Q8WVX3 66 aa10.62□□□□□ -0.71
SCARB1-209ENST00000545305 WFDC12Q8WWY7 111 aa10.62□□□□□ -0.71
SCARB1-209ENST00000545305 SLC25A39Q9BZJ4 359 aaPredicted RBP10.62□□□□□ -0.71
SCARB1-209ENST00000545305 ZFAND3Q9H8U3 227 aa10.62□□□□□ -0.71
SCARB1-209ENST00000545305 RAB19A4D1S5 217 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 H3BRN7 92 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
SCARB1-209ENST00000545305 GCHFRP30047 84 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 PSMB3P49720 205 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 FAM106AQ4KMX7 169 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 LURAP1LQ8IV03 231 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 SLC7A5P1Q8MH63 180 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 KLHL30-AS1Q8NEE0 82 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 STXBP6Q8NFX7 210 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 NARS2Q96I59 477 aaKnown RBP10.61□□□□□ -0.71
SCARB1-209ENST00000545305 METTL26Q96S19 204 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 SHANK2-AS3Q9BTD1 123 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 C20orf24Q9BUV8 137 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 GNG13Q9P2W3 67 aa10.61□□□□□ -0.71
SCARB1-209ENST00000545305 IGHV3OR16-8A0A075B7F1 116 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 TRAV5A0A0B4J249 113 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 CD28P10747 220 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 PROK1P58294 105 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 UBE2L3P68036 154 aaKnown RBP10.6□□□□□ -0.71
SCARB1-209ENST00000545305 CCL20P78556 96 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 MORN5Q5VZ52 161 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 TMEM190Q8WZ59 177 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 FAM210AQ96ND0 272 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 PAXXQ9BUH6 204 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 SCRT1Q9BWW7 348 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 SLC25A2Q9BXI2 301 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 TMEM167BQ9NRX6 74 aa10.6□□□□□ -0.71
SCARB1-209ENST00000545305 ZNF320A2RRD8 509 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 I3L521 148 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 ZP3P21754 424 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 NPPCP23582 126 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 TAGLN2P37802 199 aaKnown RBP10.59□□□□□ -0.71
SCARB1-209ENST00000545305 GUK1Q16774 197 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 TOR2AQ5JU69 321 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 LEMD1Q68G75 181 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 C11orf44Q8N8P7 122 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 DPF1Q92782 380 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 ZNF414Q96IQ9 312 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 FAM167A-AS1Q96KT0 104 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
SCARB1-209ENST00000545305 OR51M1Q9H341 326 aa10.59□□□□□ -0.71
SCARB1-209ENST00000545305 TSSC4Q9Y5U2 329 aaPredicted RBP10.59□□□□□ -0.71
SCARB1-209ENST00000545305 IGHV4OR15-8A0A075B7B6 117 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 A0A087WW49 117 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 ZNF98A6NK75 572 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 LINC01619G3V211 115 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 BCL2P10415 239 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 FOXL1Q12952 345 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 PMS2P11Q13670 270 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 PEA15Q15121 130 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 HAGHQ16775 308 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 UQCC3Q6UW78 93 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 BPIFA4PQ86YQ2 179 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 GPHB5Q86YW7 130 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
SCARB1-209ENST00000545305 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 TMPRSS5Q9H3S3 457 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
SCARB1-209ENST00000545305 LOC102723971A0A1B0GUV8 181 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 A0A1W2PRX2 142 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 ZNF207O43670 478 aaKnown RBP10.57□□□□□ -0.72
SCARB1-209ENST00000545305 OR10J4P0C629 311 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 PYYP10082 97 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 C18orf65Q6ZTR6 163 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 EIF4E3Q8N5X7 224 aaKnown RBP10.57□□□□□ -0.72
SCARB1-209ENST00000545305 OR4F17Q8NGA8 305 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 OR1N2Q8NGR9 330 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 GRAMD2BQ96HH9 432 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 OR4F4Q96R69 305 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 CITED2Q99967 270 aaPredicted RBP10.57□□□□□ -0.72
SCARB1-209ENST00000545305 TREM1Q9NP99 234 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 DAZ1Q9NQZ3 744 aaKnown RBP10.57□□□□□ -0.72
SCARB1-209ENST00000545305 TMEM14CQ9P0S9 112 aa10.57□□□□□ -0.72
SCARB1-209ENST00000545305 GP9P14770 177 aa10.56□□□□□ -0.72
SCARB1-209ENST00000545305 RPL7P18124 248 aaKnown RBP10.56□□□□□ -0.72
SCARB1-209ENST00000545305 CRYBB3P26998 211 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms