RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 TRGC1P0CF51 173 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BOP23527 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BBP33778 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BDP58876 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BCP62807 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST2H2BEQ16778 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.04□□□□□ -0.32
CHFR-224ENST00000545046 TMEM219Q86XT9 240 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 BPIFA4PQ86YQ2 179 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 FRZBQ92765 325 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BHQ93079 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BNQ99877 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIST1H2BMQ99879 126 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 HIF1ANQ9NWT6 349 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 IL36BQ9NZH7 164 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 ZFYVE26Q68DK2 2539 aa13.04□□□□□ -0.32
CHFR-224ENST00000545046 UTP20O75691 2785 aaKnown RBP13.04□□□□□ -0.32
CHFR-224ENST00000545046 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 ZNF320A2RRD8 509 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 F8W735 103 aaPredicted RBP13.03□□□□□ -0.32
CHFR-224ENST00000545046 IGHV3-23P01764 117 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 TYMSP04818 313 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 MGST1P10620 155 aaKnown RBP13.03□□□□□ -0.32
CHFR-224ENST00000545046 LINC00479Q96M42 142 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 Q9H3A6 140 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 IGLV2-8P01709 118 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 GATA3P23771 443 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 UBE2G1P62253 170 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 C5orf17Q8NAS9 161 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 OR4F17Q8NGA8 305 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 PIFOQ8TCI5 191 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 OSTCQ9NRP0 149 aa13.03□□□□□ -0.32
CHFR-224ENST00000545046 OR2T8A6NH00 312 aa13.02□□□□□ -0.33
CHFR-224ENST00000545046 SH2D7A6NKC9 451 aaPredicted RBP13.02□□□□□ -0.33
CHFR-224ENST00000545046 H3BTX0 84 aa13.02□□□□□ -0.33
CHFR-224ENST00000545046 SLC17A3O00476 420 aa13.02□□□□□ -0.33
CHFR-224ENST00000545046 FCGR2BP31994 310 aaPredicted RBP13.02□□□□□ -0.33
CHFR-224ENST00000545046 GNG5P63218 68 aa13.02□□□□□ -0.33
CHFR-224ENST00000545046 RPEL1Q2QD12 228 aa13.02□□□□□ -0.33
CHFR-224ENST00000545046 KLK9Q2XQG4 91 aa13.02□□□□□ -0.33
CHFR-224ENST00000545046 KLK9Q9UKQ9 250 aa13.02□□□□□ -0.33
CHFR-224ENST00000545046 UBR5O95071 2799 aaPredicted RBP13.01□□□□□ -0.33
CHFR-224ENST00000545046 TRAV34A0A0B4J273 112 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 BAGE2Q86Y30 109 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 RPH3ALQ9UNE2 315 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 SPG11Q96JI7 2443 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 TRAV9-1A0A075B6T8 112 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 LINC01548A6NM66 108 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 ISLRO14498 428 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 PHOX2AO14813 284 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 S100A9P06702 114 aaKnown RBP13.01□□□□□ -0.33
CHFR-224ENST00000545046 RHOGP84095 191 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 LINC00518Q8N0U6 118 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 ATG101Q9BSB4 218 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 V9GYV3 84 aa13.01□□□□□ -0.33
CHFR-224ENST00000545046 G3V318 75 aa13□□□□□ -0.33
CHFR-224ENST00000545046 CTSGP08311 255 aa13□□□□□ -0.33
CHFR-224ENST00000545046 HOXA5P20719 270 aa13□□□□□ -0.33
CHFR-224ENST00000545046 USF2Q15853 346 aaPredicted RBP13□□□□□ -0.33
CHFR-224ENST00000545046 C15orf32Q32M92 178 aa13□□□□□ -0.33
CHFR-224ENST00000545046 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
CHFR-224ENST00000545046 RNASE7Q9H1E1 156 aaKnown RBP13□□□□□ -0.33
CHFR-224ENST00000545046 CRYBG3Q68DQ2 2970 aa13□□□□□ -0.33
CHFR-224ENST00000545046 ZNF98A6NK75 572 aa13□□□□□ -0.33
CHFR-224ENST00000545046 LINC01356Q8N9X3 169 aa13□□□□□ -0.33
CHFR-224ENST00000545046 NHLRC2Q8NBF2 726 aa13□□□□□ -0.33
CHFR-224ENST00000545046 TRBV9A0A0B4J1U6 114 aa12.99□□□□□ -0.33
CHFR-224ENST00000545046 CMTM2Q8TAZ6 248 aa12.99□□□□□ -0.33
CHFR-224ENST00000545046 ZNF502Q8TBZ5 544 aa12.99□□□□□ -0.33
CHFR-224ENST00000545046 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
CHFR-224ENST00000545046 FMC1Q96HJ9 113 aa12.99□□□□□ -0.33
CHFR-224ENST00000545046 GAR1Q9NY12 217 aaKnown RBP12.99□□□□□ -0.33
CHFR-224ENST00000545046 KLF12Q9Y4X4 402 aa12.99□□□□□ -0.33
CHFR-224ENST00000545046 S100A8P05109 93 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 S100A7P31151 101 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 C9orf152Q5JTZ5 239 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 ACTL10Q5JWF8 245 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 H3BUX3 64 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 TCRAP04437 139 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 AMY1AP04745 511 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 LY6EQ16553 131 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 CHRDL1Q9BU40 450 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 SERTAD4Q9NUC0 356 aa12.98□□□□□ -0.33
CHFR-224ENST00000545046 TRAV41A0A0B4J266 112 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 IGLC2P0DOY2 106 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 CDX1P47902 265 aaPredicted RBP12.97□□□□□ -0.33
CHFR-224ENST00000545046 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
CHFR-224ENST00000545046 LYPD1Q8N2G4 141 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 EEF1AKMT3Q96AZ1 226 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 SMIM12Q96EX1 92 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 RABAC1Q9UI14 185 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 SOX21Q9Y651 276 aaPredicted RBP12.97□□□□□ -0.33
CHFR-224ENST00000545046 GPR183P32249 361 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 ADMP35318 185 aa12.97□□□□□ -0.33
CHFR-224ENST00000545046 GPR82Q96P67 336 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms