RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ZNF446Q9NWS9 450 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 DAPK2Q9UIK4 370 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 RAB22AQ9UL26 194 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 DIMT1Q9UNQ2 313 aaKnown RBP2.76□□□□□ -1.97
SNHG1-220ENST00000544550 POMPQ9Y244 141 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 KCNK7Q9Y2U2 307 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 TIMM8BQ9Y5J9 83 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-220ENST00000544550 FLG2Q5D862 2391 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-220ENST00000544550 A0A0J9YY99 117 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 METTL21EPA6NDL7 271 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 PRAC2D3DTV9 90 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 SULT1C2O00338 296 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 MFNGO00587 321 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 MYL12BO14950 172 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 GYG2O15488 501 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 ATP8B1O43520 1251 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 PSCAO43653 123 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 CLN5O75503 358 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 HIST1H1DP16402 221 aaKnown RBP2.75□□□□□ -1.97
SNHG1-220ENST00000544550 RORCP51449 518 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 SUB1P53999 127 aaKnown RBP eCLIP2.75□□□□□ -1.97
SNHG1-220ENST00000544550 PAX9P55771 341 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 PRCDQ00LT1 54 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 GAGE5Q13069 117 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 GAGE6Q13070 117 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 ASAH1Q13510 395 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF79Q15937 498 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 ACOT6Q3I5F7 207 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-220ENST00000544550 GDF5OSQ5U4N7 250 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 AADACL3Q5VUY0 350 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF493Q6ZR52 646 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 Q6ZSA8 131 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 CMTM1Q8IZ96 169 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 TMEM256Q8N2U0 113 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 OR4X1Q8NH49 305 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 LGALS14Q8TCE9 139 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 Q8WTZ3 238 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 SECTM1Q8WVN6 248 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 TMEM203Q969S6 136 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 FAM3DQ96BQ1 224 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 TMEM80Q96HE8 168 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 LINC00052Q96N35 136 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 CCDC90BQ9GZT6 254 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 CLEC2DQ9UHP7 191 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 LY96Q9Y6Y9 160 aa2.75□□□□□ -1.97
SNHG1-220ENST00000544550 A0A075B6Q4 140 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 IGKV1D-8A0A087WSZ0 117 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 TRAV5A0A0B4J249 113 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 A0A1B0GUV1 79 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 LOC100130705A0A1B0GUX0 176 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 PLAC8L1A1L4L8 177 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 EFCAB10A6NFE3 127 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF705GA8MUZ8 300 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF701M0R085 212 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-220ENST00000544550 EI24O14681 340 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 ARL6IP5O75915 188 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 NXPH4O95158 308 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 KRASP01116 189 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 IGHV3-48P01763 117 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 UCHL1P09936 223 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 EVI2AP22794 236 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 CALRP27797 417 aaKnown RBP2.74□□□□□ -1.97
SNHG1-220ENST00000544550 SNCAP37840 140 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 OPRK1P41145 380 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 ETV6P41212 452 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 HSPA13P48723 471 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 WNT4P56705 351 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 TAS2R60P59551 318 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 C2orf76Q3KRA6 126 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 TDRG1Q3Y452 100 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 FAM78BQ5VT40 261 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 PRR27Q6MZM9 219 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 GPR141Q7Z602 305 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 C10orf126Q8N4M7 172 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 Q8N814 137 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF485Q8NCK3 441 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 BPIFB6Q8NFQ5 453 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 OR51H1Q8NH63 302 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 OR4A16Q8NH70 328 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 APH1BQ8WW43 257 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 RBPMSQ93062 196 aaKnown RBP2.74□□□□□ -1.97
SNHG1-220ENST00000544550 MED4Q9NPJ6 270 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 CCL28Q9NRJ3 127 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 RPRMQ9NS64 109 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 DOK5Q9P104 306 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 ANXA10Q9UJ72 324 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 NSG2Q9Y328 171 aa2.74□□□□□ -1.97
SNHG1-220ENST00000544550 A0A096LPF7 62 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 A0A0J9YX75 114 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 A0A0U1RQV1 116 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF98A6NK75 572 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 A8MTW9 85 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 INS-IGF2F8WCM5 200 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 ISLRO14498 428 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 BUB3O43684 328 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 SCGNO76038 276 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 DUSP14O95147 198 aaKnown RBP2.73□□□□□ -1.97
SNHG1-220ENST00000544550 PPYP01298 95 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 RLN2P04090 185 aa2.73□□□□□ -1.97
SNHG1-220ENST00000544550 IL4P05112 153 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms