RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 TNFRSF13BO14836 293 aaPredicted RBP12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 RPL27AP46776 148 aaKnown RBP12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 PDLIM4P50479 330 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 TMEM186Q96B77 213 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 TP73-AS1Q9UF72 201 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 IGLC7A0M8Q6 106 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 PMCHP20382 165 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 TIGITQ495A1 244 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 NAT8BQ9UHF3 227 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 TIMM23O14925 209 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 GPR6P46095 362 aaPredicted RBP12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 VAMP3Q15836 100 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 SPATA45Q537H7 98 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 V9GYV3 84 aa12.62□□□□□ -0.39
SNRNP70-203ENST00000544278 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 CAMPP49913 170 aa12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 HNRNPA3P51991 378 aaKnown RBP12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 A0A1W2PN81 502 aa12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 GOSR1O95249 250 aa12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 PDPNQ86YL7 162 aa12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 VKORC1Q9BQB6 163 aa12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 NCOR1P1Q9H4R4 102 aa12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 ABCA12Q86UK0 2595 aa12.61□□□□□ -0.39
SNRNP70-203ENST00000544278 A0A1W2PPR1 153 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 ZNF841Q6ZN19 808 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 ZC2HC1AQ96GY0 325 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 PGPA6NDG6 321 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 ADORA2A-AS1P86434 159 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 IBA57Q5T440 356 aaKnown RBP12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 IL36BQ9NZH7 164 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 DIRC3C9JPN6 131 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 IGLV2-8P01709 118 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 SLC25A5P05141 298 aaKnown RBP12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 TPPP2P59282 170 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 RPEL1Q2QD12 228 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 FAM19A2Q8N3H0 131 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 C17orf77Q96MU5 243 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 TMEM167BQ9NRX6 74 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 SIGLEC9Q9Y336 463 aa12.6□□□□□ -0.39
SNRNP70-203ENST00000544278 B9A039 149 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 BUB1B-PAK6H3BSN5 160 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 TAS2R45P59539 299 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 LAMTOR2Q9Y2Q5 125 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 CRISP2P16562 243 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 NTF3P20783 257 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 LINC00310P59036 64 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 EXOC3-AS1Q8N2X6 119 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 RCHY1Q96PM5 261 aa12.59□□□□□ -0.39
SNRNP70-203ENST00000544278 C20orf144Q9BQM9 153 aa12.58□□□□□ -0.39
SNRNP70-203ENST00000544278 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.39
SNRNP70-203ENST00000544278 LOC105371242A0A075B767 164 aa12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 TCRBV4S1A1TA0A5B7 111 aa12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 SELENOTP62341 195 aa12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 SRSF12Q8WXF0 261 aaKnown RBP12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 CLEC7AQ9BXN2 247 aa12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 TIMM8BQ9Y5J9 83 aaPredicted RBP12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 LCN12Q6JVE5 192 aa12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 VSTM2AQ8TAG5 236 aa12.58□□□□□ -0.4
SNRNP70-203ENST00000544278 IGHV3OR16-10A0A075B7F0 116 aa12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 FOXL1Q12952 345 aa12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 SIGLECL1Q8N7X8 197 aa12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 IGSF10Q6WRI0 2623 aa12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 SETD2Q9BYW2 2564 aaPredicted RBP12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 NCBP2LA6PVI3 153 aaKnown RBP12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 IGLV1-47P01700 117 aa12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 LINC00322Q6ZN03 302 aaPredicted RBP12.57□□□□□ -0.4
SNRNP70-203ENST00000544278 AMTP48728 403 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 FXYD5Q96DB9 178 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 TYMSP04818 313 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 PSG1P11464 419 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 TEX43Q6ZNM6 134 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 DYNAPQ8N1N2 210 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 GNB4Q9HAV0 340 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 SRIP30626 198 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 CDKN1BP46527 198 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 UQCRFS1P47985 274 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 ZNF137PP52743 207 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 SUB1P53999 127 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 LCN2P80188 198 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 S100A7AQ86SG5 101 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 ZNF329Q86UD4 541 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
SNRNP70-203ENST00000544278 CA7P43166 264 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 UBE2V1Q13404 147 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 IGFL4Q6B9Z1 124 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 MUC21A0A0G2JKD1 596 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 MUC21A0A140T8X8 626 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 PEX7O00628 323 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 HYPMO75409 117 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 RIPPLY3P57055 190 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 TMEM249Q2WGJ8 235 aa12.55□□□□□ -0.4
SNRNP70-203ENST00000544278 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms