RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 RNF144BQ7Z419 303 aa10.76□□□□□ -0.69
TNC-212ENST00000542877 GTSCR1Q86UQ5 136 aa10.76□□□□□ -0.69
TNC-212ENST00000542877 LYPD1Q8N2G4 141 aa10.76□□□□□ -0.69
TNC-212ENST00000542877 DOCK6Q96HP0 2047 aa10.76□□□□□ -0.69
TNC-212ENST00000542877 FAM90A2PQ658T7 463 aa10.76□□□□□ -0.69
TNC-212ENST00000542877 FOXL2NBQ6ZUU3 175 aa10.76□□□□□ -0.69
TNC-212ENST00000542877 BCL6BQ8N143 479 aaPredicted RBP10.76□□□□□ -0.69
TNC-212ENST00000542877 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
TNC-212ENST00000542877 LINC00473A8K010 186 aa10.75□□□□□ -0.69
TNC-212ENST00000542877 C15orf62A8K5M9 175 aa10.75□□□□□ -0.69
TNC-212ENST00000542877 ATXN8Q156A1 80 aa10.75□□□□□ -0.69
TNC-212ENST00000542877 TRAV41A0A0B4J266 112 aa10.75□□□□□ -0.69
TNC-212ENST00000542877 SMAD7O15105 426 aaKnown RBP10.75□□□□□ -0.69
TNC-212ENST00000542877 MALP21145 153 aa10.75□□□□□ -0.69
TNC-212ENST00000542877 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
TNC-212ENST00000542877 NCR2O95944 276 aa10.75□□□□□ -0.69
TNC-212ENST00000542877 H0YJW9 148 aa10.75□□□□□ -0.69
TNC-212ENST00000542877 CSRP1P21291 193 aaKnown RBP10.75□□□□□ -0.69
TNC-212ENST00000542877 TMEM178BH3BS89 294 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 M0R2P5 195 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 C15orf32Q32M92 178 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 TPTE2P1Q5T6R2 138 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 SPSB3Q6PJ21 355 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 ZNF138P52744 262 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 LHFPL4Q7Z7J7 247 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 METRNQ9UJH8 293 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 SRSF6Q13247 344 aaKnown RBP10.74□□□□□ -0.69
TNC-212ENST00000542877 PSG3Q16557 428 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 ZNF672Q499Z4 452 aaPredicted RBP10.74□□□□□ -0.69
TNC-212ENST00000542877 KLF17Q5JT82 389 aaPredicted RBP10.74□□□□□ -0.69
TNC-212ENST00000542877 MINOS1Q5TGZ0 78 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 MINOS1-NBL1R4GNA1 71 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 RPL15P61313 204 aaKnown RBP10.74□□□□□ -0.69
TNC-212ENST00000542877 TMEM105Q8N8V8 129 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 PLEKHB2Q96CS7 222 aa10.74□□□□□ -0.69
TNC-212ENST00000542877 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 C9orf139Q6ZV77 190 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 ZNF664Q8N3J9 261 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 TMEM8BA6NDV4 472 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 SH2D1AO60880 128 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 TOMM40O96008 361 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 MST1LQ2TV78 715 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 LCN12Q6JVE5 192 aa10.73□□□□□ -0.69
TNC-212ENST00000542877 DMRTC2Q8IXT2 367 aaPredicted RBP10.73□□□□□ -0.69
TNC-212ENST00000542877 ARHGEF17Q96PE2 2063 aaPredicted RBP10.73□□□□□ -0.69
TNC-212ENST00000542877 MPV17L2Q567V2 206 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 GGTLC3B5MD39 225 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 TMEM86BQ8N661 226 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 DPH3P1Q9H4G8 78 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 UBE2V1Q13404 147 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 C5orf24Q7Z6I8 188 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 FHL1Q13642 323 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 Q6ZRM9 215 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 GAFA1Q96PS6 74 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
TNC-212ENST00000542877 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 CKS1BP61024 79 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 LINC00477Q96M19 166 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 CD33P20138 364 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 Q0VG73 95 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 A0A087X0K7 114 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 A0A1W2PRX2 142 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 RNASE2P10153 161 aaKnown RBP10.71□□□□□ -0.69
TNC-212ENST00000542877 B3GALT5-AS1P59052 145 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 Q5PR19 223 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 ZNF329Q86UD4 541 aa10.71□□□□□ -0.69
TNC-212ENST00000542877 LILRA1O75019 489 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 GAGE2BQ13066 116 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 C5orf64Q2M2E5 130 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 GAGE2EQ4V326 116 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 ZNF581Q9P0T4 197 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 VCYO14598 125 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 CD59P13987 128 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 Q0VFX4 171 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 VMO1Q7Z5L0 202 aa10.71□□□□□ -0.7
TNC-212ENST00000542877 TRBV7-1A0A0A6YYK4 115 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 TRAV40A0A0B4J280 105 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 ITGB1BP1O14713 200 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 HTN3P15516 51 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 BMPERQ8N8U9 685 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 SIGLEC9Q9Y336 463 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 TP53BP1Q12888 1972 aaPredicted RBP10.7□□□□□ -0.7
TNC-212ENST00000542877 IGHV3-64A0A075B6Q5 118 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 IGKV1D-17A0A075B6S4 117 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 CD5LO43866 347 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 C11orf68Q9H3H3 251 aaKnown RBP10.7□□□□□ -0.7
TNC-212ENST00000542877 ZDBF2Q9HCK1 2354 aa10.7□□□□□ -0.7
TNC-212ENST00000542877 NAA38Q9BRA0 125 aaKnown RBP10.7□□□□□ -0.7
TNC-212ENST00000542877 M0R1W7 72 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
TNC-212ENST00000542877 ZNF876PQ49A33 203 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 ZFAND6Q6FIF0 208 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 BUB1B-PAK6H3BSN5 160 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 MDS2Q8NDY4 140 aa10.69□□□□□ -0.7
TNC-212ENST00000542877 DLX4Q92988 240 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms