RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 AESQ08117 197 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 LYRM7Q5U5X0 104 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 C2orf82Q6UX34 121 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 OR51A2Q8NGJ7 313 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 OR5D14Q8NGL3 314 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 LINC00052Q96N35 136 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 GPER1Q99527 375 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.19□□□□□ -2.38
KNTC1-213ENST00000542727 IDI2-AS1Q9NZ38 188 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 TNFSF18Q9UNG2 199 aa0.19□□□□□ -2.38
KNTC1-213ENST00000542727 CECR2Q9BXF3 1484 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 TRAV10A0A0B4J240 114 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 H3BRM9 83 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 J3QRK9 145 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 M0R378 163 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 KPNA3O00505 521 aaPredicted RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 NDUFB3O43676 98 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 RPP14O95059 124 aaKnown RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 IGLV3-1P01715 115 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 SERPINB9P50453 376 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 CEBPGP53567 150 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 AP3S2P59780 193 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 ITGB3BPQ13352 177 aaPredicted RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 KRR1Q13601 381 aaKnown RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 IAH1Q2TAA2 248 aaPredicted RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 PTRHD1Q6GMV3 140 aaKnown RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 KRTAP26-1Q6PEX3 210 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 HAGHLQ6PII5 290 aaPredicted RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 Q6Q795 121 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 C4orf22Q6V702 233 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 LINC00575Q6W349 94 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 PDZD9Q8IXQ8 264 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 C12orf45Q8N5I9 185 aaPredicted RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 STAG3L4Q8TBR4 150 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 PPP1R14BQ96C90 147 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 TP53RKQ96S44 253 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 SMR3AQ99954 134 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 TMEM138Q9NPI0 162 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 TVP23BQ9NYZ1 205 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 GLTPQ9NZD2 209 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 PCTPQ9UKL6 214 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 CCDC144AA2RUR9 1427 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 KDM6AO15550 1401 aaPredicted RBP0.18□□□□□ -2.38
KNTC1-213ENST00000542727 COL24A1Q17RW2 1714 aa0.18□□□□□ -2.38
KNTC1-213ENST00000542727 MYH3P11055 1940 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 NUPR2A6NF83 97 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 F8W1H4 67 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 NUPR1O60356 82 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 CST8O60676 142 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 KDELR1P24390 212 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 HOXA6P31267 233 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 RNASE4P34096 147 aaKnown RBP0.17□□□□□ -2.38
KNTC1-213ENST00000542727 PIGPP57054 158 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 RANP62826 216 aaKnown RBP0.17□□□□□ -2.38
KNTC1-213ENST00000542727 EDDM3AQ14507 147 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 TEN1Q86WV5 123 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 PSMF1Q92530 271 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 SLC25A21Q9BQT8 299 aaPredicted RBP0.17□□□□□ -2.38
KNTC1-213ENST00000542727 MED29Q9NX70 200 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 ADCY9O60503 1353 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 ATG2AQ2TAZ0 1938 aa0.17□□□□□ -2.38
KNTC1-213ENST00000542727 NCOA1Q15788 1441 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 TRAV23DV6A0A075B6W5 121 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 IGLV3-32A0A0A0MS00 114 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 TRGV10A0A0A0MS01 117 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 ERC2-IT1O76042 136 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 TCRBP04435 133 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 ERP29P30040 261 aaKnown RBP0.16□□□□□ -2.38
KNTC1-213ENST00000542727 LSM6P62312 80 aaKnown RBP0.16□□□□□ -2.38
KNTC1-213ENST00000542727 SPINK9Q5DT21 86 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 BCL2L15Q5TBC7 163 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 ZNF833PQ6ZTB9 187 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 OR10K1Q8NGX5 313 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 CANT1Q8WVQ1 401 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 LINC00467Q9BRT7 94 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 WFDC10AQ9H1F0 79 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 LY96Q9Y6Y9 160 aa0.16□□□□□ -2.38
KNTC1-213ENST00000542727 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.38
KNTC1-213ENST00000542727 APCP25054 2843 aa0.15□□□□□ -2.38
KNTC1-213ENST00000542727 TRAV4A0A0B4J268 109 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 A0A0D9SG42 100 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 NIPSNAP2O75323 286 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 PPYP01298 95 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 SPINT3P49223 89 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 FXYD6P3P58550 94 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 TMEM97Q5BJF2 176 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 Q8TAT8 98 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 ZNF431Q8TF32 576 aaPredicted RBP0.15□□□□□ -2.39
KNTC1-213ENST00000542727 TSKUQ8WUA8 353 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 ARL5BQ96KC2 179 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 YPEL2Q96QA6 119 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 SIGMAR1Q99720 223 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 PRRT1Q99946 306 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 GGACTQ9BVM4 153 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 KIFC1Q9BW19 673 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 TMEM126AQ9H061 195 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 TMEM133Q9H2Q1 129 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 TRPM7Q96QT4 1865 aa0.15□□□□□ -2.39
KNTC1-213ENST00000542727 ZFYVE9O95405 1425 aa0.14□□□□□ -2.39
KNTC1-213ENST00000542727 FMN1Q68DA7 1419 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms