RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PFDN2Q9UHV9 154 aa9.46□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 ZNF705EA8MWA4 302 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TEX46H3BTG2 121 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 HYPMO75409 117 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 HSPB1P04792 205 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 IL4P05112 153 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 ZP3P21754 424 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 CDC34P49427 236 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 RAB2AP61019 212 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 CLLU1Q5K131 121 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FAM74A1Q5RGS3 127 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 C10orf113Q5VZT2 155 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 DNAJC4Q9NNZ3 241 aa9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 MRPL27Q9P0M9 148 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PUS1Q9Y606 427 aaKnown RBP eCLIP9.45□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TRAV1-1A0A0B4J248 108 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 A0A1W2PPV4 95 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 HBE1P02100 147 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 NMBP08949 121 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TAS2R45P59539 299 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 LYZP61626 148 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 KHDC1LQ5JSQ8 128 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TOMM20LQ6UXN7 152 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 RPP25LQ8N5L8 163 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FAM213BQ8TBF2 198 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TMEM37Q8WXS4 190 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TMEM190Q8WZ59 177 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 VSIRQ9H7M9 311 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 HIGD1AQ9Y241 93 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 RFNGQ9Y644 331 aa9.44□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 LGALS9O00182 355 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TRBV12-3P01733 135 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 H2AFB1P0C5Y9 115 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 CD28P10747 220 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 ORM2P19652 201 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 RPEL1Q2QD12 228 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 BEAN1Q3B7T3 259 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FAM106AQ4KMX7 169 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FAM78BQ5VT40 261 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 REC114Q7Z4M0 266 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 NDUFA11Q86Y39 141 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 KLHL30-AS1Q8NEE0 82 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 STXBP6Q8NFX7 210 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 OR1B1Q8NGR6 318 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 LYPD6BQ8NI32 183 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 ZNF414Q96IQ9 312 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 RABAC1Q9UI14 185 aa9.43□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 ANKRD34BA5PLL1 514 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 A8MWP6 167 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 NUDT19A8MXV4 375 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 LINC01619G3V211 115 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 K7EMT4 169 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FHL3Q13643 280 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 USF2Q15853 346 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 GCSAMLQ5JQS6 135 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FAM122CQ6P4D5 195 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PQLC2Q6ZP29 291 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 LINC00305Q7Z4B0 112 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 RAB24Q969Q5 203 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 METTL26Q96S19 204 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 CITED2Q99967 270 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 SHANK2-AS3Q9BTD1 123 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PBDC1Q9BVG4 233 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 SEPSECSQ9HD40 501 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 TECRQ9NZ01 308 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 UFC1Q9Y3C8 167 aa9.42□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 IGHV4OR15-8A0A075B7B6 117 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 A0A087WW49 117 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 MAP1LC3B2A6NCE7 125 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 H3BRN7 92 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 M0QZ24 198 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 C8orf88P0DMB2 117 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 CRYBB3P26998 211 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 BMI1P35226 326 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 FHITP49789 147 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 PMS2P11Q13670 270 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 ZNF726P1Q15940 193 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 OR1N2Q8NGR9 330 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 DPF1Q92782 380 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 NARS2Q96I59 477 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 GPR82Q96P67 336 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 OR5B12Q96R08 314 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 MAP1LC3BQ9GZQ8 125 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 SLC25A22Q9H936 323 aa9.41□□□□□ -0.9
CACNA1C-IT3-201ENST00000542680 DAZ1Q9NQZ3 744 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms