RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 FCGR2BP31994 310 aaPredicted RBP5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 ARL3P36405 182 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 SULT1A2P50226 295 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 RAB2AP61019 212 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 YPEL3P61236 119 aaPredicted RBP5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 LYZP61626 148 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 BLOC1S1P78537 153 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 KRTAP24-1Q3LI83 254 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 FAM209BQ5JX69 171 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 FAM122CQ6P4D5 195 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 SPSB3Q6PJ21 355 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 ZNF491Q8N8L2 437 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 C11orf44Q8N8P7 122 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 OR51G1Q8NGK1 321 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 OR1L4Q8NGR5 311 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 OR1B1Q8NGR6 318 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 TMEM158Q8WZ71 300 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 CCDC140Q96MF4 163 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 CHRDL1Q9BU40 450 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 DNAJC4Q9NNZ3 241 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 RPRMQ9NS64 109 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 DOK5Q9P104 306 aa5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 PEF1Q9UBV8 284 aaKnown RBP5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 FBN1P35555 2871 aaKnown RBP5.14□□□□□ -1.59
CLTCL1-206ENST00000540896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 A0A1B0GUS0 222 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 ZNF320A2RRD8 509 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 HYPMO75409 117 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 OR2C1O95371 312 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 TOMM40O96008 361 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 IL4P05112 153 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 FHITP49789 147 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 RHOBP62745 196 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 RELQ04864 619 aaPredicted RBP5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 GCSAMLQ5JQS6 135 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 PXDC1Q5TGL8 231 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 FAM78BQ5VT40 261 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 C10orf113Q5VZT2 155 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 ZNF343Q6P1L6 599 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 DPPA3Q6W0C5 159 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 ZNF600Q6ZNG1 722 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 S100A7AQ86SG5 101 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 IQCF2Q8IXL9 164 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 SFT2D1Q8WV19 159 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 DPF1Q92782 380 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 SAT2Q96F10 170 aaPredicted RBP5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 UBE2E2Q96LR5 201 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 ATP6V0BQ99437 205 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 PFDN5Q99471 154 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 RNF2Q99496 336 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 C19orf24Q9BVV8 132 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 HRH4Q9H3N8 390 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 VSIRQ9H7M9 311 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 HIGD1AQ9Y241 93 aa5.13□□□□□ -1.59
CLTCL1-206ENST00000540896 STAB1Q9NY15 2570 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 IGHV3OR16-8A0A075B7F1 116 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 CTXND1A0A1B0GTU2 59 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 BMPR1BO00238 502 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 HMGB3O15347 200 aaKnown RBP5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 GGCTO75223 188 aaKnown RBP5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 HBE1P02100 147 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 CD28P10747 220 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 S100A7P31151 101 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 CDX1P47902 265 aaPredicted RBP5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 CDC34P49427 236 aaPredicted RBP5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 KIAA0141Q14154 515 aaPredicted RBP5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 RPEL1Q2QD12 228 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 KRTAP21-3Q3LHN1 58 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 FAM106AQ4KMX7 169 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 CLLU1Q5K131 121 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 LCN15Q6UWW0 184 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 TOMM20LQ6UXN7 152 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 LINC00305Q7Z4B0 112 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 RPP25LQ8N5L8 163 aaKnown RBP5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 RNF152Q8N8N0 203 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 GATAD1Q8WUU5 269 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 RNF125Q96EQ8 232 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 C20orf24Q9BUV8 137 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 SLC25A22Q9H936 323 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 FUT9Q9Y231 359 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 PUS1Q9Y606 427 aaKnown RBP eCLIP5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 TENM1Q9UKZ4 2725 aa5.12□□□□□ -1.59
CLTCL1-206ENST00000540896 WI2-2373I1.2A0A1W2PRP0 233 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 A0A1W2PRX2 142 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 MAP1LC3B2A6NCE7 125 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 NDUFA4O00483 81 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 ZNF207O43670 478 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 EIF3GO75821 320 aaKnown RBP eCLIP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 TRBV12-3P01733 135 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 HSPB1P04792 205 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 NMBP08949 121 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 LGALS1P09382 135 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 FGF8P55075 233 aaPredicted RBP5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 TAS2R45P59539 299 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 FOXL1Q12952 345 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 TCTEX1D4Q5JR98 221 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 HIST2H2BDQ6DRA6 164 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 PATE2Q6UY27 113 aa5.11□□□□□ -1.59
CLTCL1-206ENST00000540896 MIR17HGQ75NE6 70 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms