RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 HNF1AP20823 631 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 BLCAPP62952 87 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 CHRDL1Q9BU40 450 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 NAV2Q8IVL1 2488 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 CTSGP08311 255 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 C19orf54Q5BKX5 351 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 LINC01551Q86U37 167 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 ZNF502Q8TBZ5 544 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 TXN2Q99757 166 aa17.51■□□□□ 0.39
HOMER3-204ENST00000539827 IGHV4-59P01825 116 aa17.5■□□□□ 0.39
HOMER3-204ENST00000539827 CRIP2P52943 208 aaPredicted RBP17.5■□□□□ 0.39
HOMER3-204ENST00000539827 USF2Q15853 346 aaPredicted RBP17.5■□□□□ 0.39
HOMER3-204ENST00000539827 Q6ZS46 218 aa17.5■□□□□ 0.39
HOMER3-204ENST00000539827 H3BRN7 92 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 NBEAP1P0C6P0 100 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 GPR183P32249 361 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 RPL35P42766 123 aaKnown RBP17.49■□□□□ 0.39
HOMER3-204ENST00000539827 RANP62826 216 aaKnown RBP17.49■□□□□ 0.39
HOMER3-204ENST00000539827 ZNF329Q86UD4 541 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 LINC00518Q8N0U6 118 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 ZFP82Q8N141 532 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 C2CD4CQ8TF44 421 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 SHANK2-AS3Q9BTD1 123 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 CTDSP1Q9GZU7 261 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 CLDN34H7C241 214 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 M0QZK8 103 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 FSHBP01225 129 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 FCGR2BP31994 310 aaPredicted RBP17.49■□□□□ 0.39
HOMER3-204ENST00000539827 ADMP35318 185 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 CYB5R2Q6BCY4 276 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 C1QL4Q86Z23 238 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 NECAP1Q8NC96 275 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 WFDC11Q8NEX6 87 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 NOL4LQ96MY1 436 aaPredicted RBP17.49■□□□□ 0.39
HOMER3-204ENST00000539827 CELSR1Q9NYQ6 3014 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 CSPG4Q6UVK1 2322 aa17.49■□□□□ 0.39
HOMER3-204ENST00000539827 IGHG2P01859 326 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 S100A6P06703 90 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 ELOBQ15370 118 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 ZNF600Q6ZNG1 722 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 OCC1Q8TAD7 63 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 IGHV3-35A0A0C4DH35 117 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 HELTA6NFD8 242 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 TMEM242Q9NWH2 141 aa17.48■□□□□ 0.39
HOMER3-204ENST00000539827 ZFHX3Q15911 3703 aa17.47■□□□□ 0.39
HOMER3-204ENST00000539827 SCGB2A1O75556 95 aa17.47■□□□□ 0.39
HOMER3-204ENST00000539827 CLEC3BP05452 202 aa17.47■□□□□ 0.39
HOMER3-204ENST00000539827 CXCL1P09341 107 aa17.47■□□□□ 0.39
HOMER3-204ENST00000539827 AKR1D1P51857 326 aa17.47■□□□□ 0.39
HOMER3-204ENST00000539827 CLEC19AQ6UXS0 136 aa17.47■□□□□ 0.39
HOMER3-204ENST00000539827 TGIF2-C20orf24A0A0A6YYL0 155 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 IGF1P05019 195 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 CIARTQ8N365 385 aaPredicted RBP17.46■□□□□ 0.39
HOMER3-204ENST00000539827 EEF1AKMT3Q96AZ1 226 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 CCDC140Q96MF4 163 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 TMEM14CQ9P0S9 112 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 PRRC2AP48634 2157 aaKnown RBP17.46■□□□□ 0.39
HOMER3-204ENST00000539827 HECTD1Q9ULT8 2610 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 PGPA6NDG6 321 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 H7BYZ3 331 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 IER3P46695 156 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 ATP5G2Q06055 141 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 GNB4Q9HAV0 340 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 ZNF586Q9NXT0 402 aa17.46■□□□□ 0.39
HOMER3-204ENST00000539827 APCP25054 2843 aa17.45■□□□□ 0.38
HOMER3-204ENST00000539827 MYCNOSP40205 109 aa17.45■□□□□ 0.38
HOMER3-204ENST00000539827 GNG5P63218 68 aa17.45■□□□□ 0.38
HOMER3-204ENST00000539827 ZNF414Q96IQ9 312 aa17.45■□□□□ 0.38
HOMER3-204ENST00000539827 IGHV3OR16-8A0A075B7F1 116 aa17.44■□□□□ 0.38
HOMER3-204ENST00000539827 ZNF98A6NK75 572 aa17.44■□□□□ 0.38
HOMER3-204ENST00000539827 C9JCJ5 164 aa17.44■□□□□ 0.38
HOMER3-204ENST00000539827 SMAD7O15105 426 aaKnown RBP17.44■□□□□ 0.38
HOMER3-204ENST00000539827 TRGV3P03979 118 aa17.44■□□□□ 0.38
HOMER3-204ENST00000539827 HIST1H1EP10412 219 aaKnown RBP17.44■□□□□ 0.38
HOMER3-204ENST00000539827 CENPWQ5EE01 88 aa17.44■□□□□ 0.38
HOMER3-204ENST00000539827 LINC00479Q96M42 142 aa17.44■□□□□ 0.38
HOMER3-204ENST00000539827 SLC25A5P05141 298 aaKnown RBP17.44■□□□□ 0.38
HOMER3-204ENST00000539827 ANAPC16Q96DE5 110 aa17.44■□□□□ 0.38
HOMER3-204ENST00000539827 NBPF19A0A087WUL8 3843 aa17.43■□□□□ 0.38
HOMER3-204ENST00000539827 K7EN84 100 aa17.43■□□□□ 0.38
HOMER3-204ENST00000539827 PEX7O00628 323 aa17.43■□□□□ 0.38
HOMER3-204ENST00000539827 GNG4P50150 75 aa17.43■□□□□ 0.38
HOMER3-204ENST00000539827 BPIFA4PQ86YQ2 179 aa17.43■□□□□ 0.38
HOMER3-204ENST00000539827 Q9H3A6 140 aa17.43■□□□□ 0.38
HOMER3-204ENST00000539827 RPH3ALQ9UNE2 315 aa17.43■□□□□ 0.38
HOMER3-204ENST00000539827 C5orf52A6NGY3 159 aa17.42■□□□□ 0.38
HOMER3-204ENST00000539827 PPIFP30405 207 aaKnown RBP17.42■□□□□ 0.38
HOMER3-204ENST00000539827 TRBV7-1A0A0A6YYK4 115 aa17.42■□□□□ 0.38
HOMER3-204ENST00000539827 UBE2CO00762 179 aa17.42■□□□□ 0.38
HOMER3-204ENST00000539827 GALR1P47211 349 aa17.42■□□□□ 0.38
HOMER3-204ENST00000539827 TPPP2P59282 170 aa17.42■□□□□ 0.38
HOMER3-204ENST00000539827 C17orf77Q96MU5 243 aa17.42■□□□□ 0.38
HOMER3-204ENST00000539827 EPDR1Q9UM22 224 aa17.42■□□□□ 0.38
HOMER3-204ENST00000539827 TRAV34A0A0B4J273 112 aa17.41■□□□□ 0.38
HOMER3-204ENST00000539827 FAM223BA6NKX1 122 aa17.41■□□□□ 0.38
HOMER3-204ENST00000539827 AP4M1O00189 453 aa17.41■□□□□ 0.38
HOMER3-204ENST00000539827 TGOLN2O43493 480 aa17.41■□□□□ 0.38
HOMER3-204ENST00000539827 SNRPEP62304 92 aaKnown RBP17.41■□□□□ 0.38
HOMER3-204ENST00000539827 TOMM20LQ6UXN7 152 aa17.41■□□□□ 0.38
HOMER3-204ENST00000539827 C9orf139Q6ZV77 190 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms