RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 DEFB130AP0DP74 79 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 F2RP25116 425 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 NKX2-1P43699 371 aaPredicted RBP8.37□□□□□ -1.07
YBX3-207ENST00000539204 FXYD4P59646 89 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 ICAM4Q14773 271 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 ZFP69Q49AA0 526 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 FAAP20Q6NZ36 180 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 C16orf54Q6UWD8 224 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 ARRDC1Q8N5I2 433 aa8.37□□□□□ -1.07
YBX3-207ENST00000539204 LYRM9A8MSI8 78 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 M0QYG6 137 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 TAS2R46P59540 309 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 FCN2Q15485 313 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 C1orf158Q8N1D5 194 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 OR11H7Q8NGC8 314 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 MAGT1Q9H0U3 335 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 NRN1Q9NPD7 142 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 U3KQE9 123 aa8.36□□□□□ -1.07
YBX3-207ENST00000539204 CLN5O75503 358 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 SCGB2A1O75556 95 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 FCER2P06734 321 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 HRH1P35367 487 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 SNCAP37840 140 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
YBX3-207ENST00000539204 GDF5OSQ5U4N7 250 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 NOXA1Q86UR1 476 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 TMEM17Q86X19 198 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 ZNF709Q8N972 641 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 ZBTB8BQ8NAP8 495 aaPredicted RBP8.35□□□□□ -1.07
YBX3-207ENST00000539204 BEST4Q8NFU0 473 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 OR5AP2Q8NGF4 316 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 OR4B1Q8NGF8 309 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 OR13C8Q8NGS7 320 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 OR4A16Q8NH70 328 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 TERB2Q8NHR7 220 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 GLMPQ8WWB7 406 aa8.35□□□□□ -1.07
YBX3-207ENST00000539204 RLN1P04808 185 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 ATP5G1P05496 136 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 ANXA3P12429 323 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 ANXA7P20073 488 aaKnown RBP8.34□□□□□ -1.07
YBX3-207ENST00000539204 ATP5G3P48201 142 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 ERVFC1-1P60608 527 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 HSPE1P61604 102 aaKnown RBP8.34□□□□□ -1.07
YBX3-207ENST00000539204 PSG9Q00887 426 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 PRCDQ00LT1 54 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 LHFPL1Q86WI0 220 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 OR5H2Q8NGV7 314 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 ZNF431Q8TF32 576 aaPredicted RBP8.34□□□□□ -1.07
YBX3-207ENST00000539204 ASB13Q8WXK3 278 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 ZNF486Q96H40 463 aaPredicted RBP8.34□□□□□ -1.07
YBX3-207ENST00000539204 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 SCGB3A2Q96PL1 93 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 SLC35B3Q9H1N7 401 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 SAV1Q9H4B6 383 aaPredicted RBP8.34□□□□□ -1.07
YBX3-207ENST00000539204 ZNF586Q9NXT0 402 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 PLA2G2DQ9UNK4 145 aa8.34□□□□□ -1.07
YBX3-207ENST00000539204 CBY3A6NI87 242 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 SSNA1O43805 119 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 PGLYRP1O75594 196 aaPredicted RBP8.33□□□□□ -1.08
YBX3-207ENST00000539204 OR4E1P0C645 316 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 DEFB1P60022 68 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 SURF2Q15527 256 aaPredicted RBP8.33□□□□□ -1.08
YBX3-207ENST00000539204 FOXI2Q6ZQN5 318 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 Q8WTZ3 238 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 MRGPRFQ96AM1 343 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 HYLS1Q96M11 299 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 LINC00052Q96N35 136 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 UHRF2Q96PU4 802 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 SEC22CQ9BRL7 303 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 GPR132Q9UNW8 380 aa8.33□□□□□ -1.08
YBX3-207ENST00000539204 TRAV30A0A087WSZ9 112 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 PMP2P02689 132 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 GIPP09681 153 aaPredicted RBP8.32□□□□□ -1.08
YBX3-207ENST00000539204 CXCL3P19876 107 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 SUB1P53999 127 aaKnown RBP eCLIP8.32□□□□□ -1.08
YBX3-207ENST00000539204 LINC00315P59091 139 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 RAP2BP61225 183 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 DHODHQ02127 395 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 TIGITQ495A1 244 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 SCGB2B2Q4G0G5 96 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 SPATA31B1PQ5VZV4 182 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 DHRS11Q6UWP2 260 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 SIGLEC15Q6ZMC9 328 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 H2BFWTQ7Z2G1 175 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 OR4X1Q8NH49 305 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 UPK3BQ9BT76 320 aa8.32□□□□□ -1.08
YBX3-207ENST00000539204 A0A0B4J2A0 478 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 CORTO00230 105 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 IGKV1-17P01599 117 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 GCSHP23434 173 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 ID1P41134 155 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 HERV-K104P61576 105 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 TSPAN5P62079 268 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 MLANAQ16655 118 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 ESRGQ1W209 222 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 TMEM128Q5BJH2 165 aa8.31□□□□□ -1.08
YBX3-207ENST00000539204 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms