RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 CORTO00230 105 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 SFT2D2O95562 160 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 IGKV1-17P01599 117 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 HNRNPCP07910 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 RNASE2P10153 161 aaKnown RBP10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 ANXA7P20073 488 aaKnown RBP10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 VAMP1P23763 118 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 HOXA1P49639 335 aaPredicted RBP10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 TMEM222Q9H0R3 208 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 YTHDF2Q9Y5A9 579 aaKnown RBP10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 U3KQE9 123 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
CCDC144NL-202ENST00000539177 SCGB2A1O75556 95 aa10.33□□□□□ -0.76
CCDC144NL-202ENST00000539177 AP2S1P53680 142 aaPredicted RBP10.33□□□□□ -0.76
CCDC144NL-202ENST00000539177 LGI3Q8N145 548 aa10.33□□□□□ -0.76
CCDC144NL-202ENST00000539177 OR4X1Q8NH49 305 aa10.33□□□□□ -0.76
CCDC144NL-202ENST00000539177 COQ8AQ8NI60 647 aa10.33□□□□□ -0.76
CCDC144NL-202ENST00000539177 NRN1Q9NPD7 142 aa10.33□□□□□ -0.76
CCDC144NL-202ENST00000539177 LOC102723971A0A1B0GUV8 181 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 C9orf170A2RU37 121 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 SNRPGP15A8MWD9 76 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 CDS2O95674 445 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 OR5AC1P0C628 307 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 UCP1P25874 307 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 DAD1P61803 113 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 PPP1R1AQ13522 171 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 ZNF431Q8TF32 576 aaPredicted RBP10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 GLYATL2Q8WU03 294 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 IL22RA2Q969J5 263 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 TP53RKQ96S44 253 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 PDCD10Q9BUL8 212 aa10.32□□□□□ -0.76
CCDC144NL-202ENST00000539177 A0A0B4J2A0 478 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 SUPT4H1P63272 117 aaKnown RBP10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 USF2Q15853 346 aaPredicted RBP10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 SP6Q3SY56 376 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 GSG1LQ6UXU4 331 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 SIGLEC15Q6ZMC9 328 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 OR4B1Q8NGF8 309 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 ZNRF2Q8NHG8 242 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 SLC35B3Q9H1N7 401 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 SHPKQ9UHJ6 478 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 TMEM56-RWDD3S4R434 201 aa10.31□□□□□ -0.76
CCDC144NL-202ENST00000539177 DUXBA0A1W2PPF3 345 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 HBE1P02100 147 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 IL4P05112 153 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 NKX2-1P43699 371 aaPredicted RBP10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 AKR1C2P52895 323 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 FAM219AQ8IW50 185 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 C12orf45Q8N5I9 185 aaPredicted RBP10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 ZNF709Q8N972 641 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 Q8WTZ3 238 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 RBPMSQ93062 196 aaKnown RBP10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 RRNAD1Q96FB5 475 aaKnown RBP10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 LINC00052Q96N35 136 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 ENY2Q9NPA8 101 aa10.3□□□□□ -0.76
CCDC144NL-202ENST00000539177 TRAV30A0A087WSZ9 112 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 A0A0B4J293 547 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 RPS10-NUDT3A0A1W2PQS6 291 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 INS-IGF2F8WCM5 200 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 NUDT3O95989 172 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 IGLC1P0CG04 106 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 RND2P52198 227 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 TMEM268Q5VZI3 342 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 SELENOHQ8IZQ5 122 aaKnown RBP10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 C1orf158Q8N1D5 194 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 OR1S2Q8NGQ3 325 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 RNASE11Q8TAA1 199 aaKnown RBP10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 SEPSECSQ9HD40 501 aaKnown RBP10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 CACFD1Q9UGQ2 172 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 GOLT1BQ9Y3E0 138 aa10.29□□□□□ -0.76
CCDC144NL-202ENST00000539177 OR10J1P30954 320 aa10.28□□□□□ -0.76
CCDC144NL-202ENST00000539177 RRN3P1Q2M238 152 aa10.28□□□□□ -0.76
CCDC144NL-202ENST00000539177 SEC22CQ9BRL7 303 aa10.28□□□□□ -0.76
CCDC144NL-202ENST00000539177 SAV1Q9H4B6 383 aaPredicted RBP10.28□□□□□ -0.76
CCDC144NL-202ENST00000539177 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.76
CCDC144NL-202ENST00000539177 EPM2AB3EWF7 344 aa10.27□□□□□ -0.77
CCDC144NL-202ENST00000539177 F6UB75 175 aa10.27□□□□□ -0.77
CCDC144NL-202ENST00000539177 BUB3O43684 328 aa10.27□□□□□ -0.77
CCDC144NL-202ENST00000539177 SSNA1O43805 119 aa10.27□□□□□ -0.77
CCDC144NL-202ENST00000539177 P0C879 139 aa10.27□□□□□ -0.77
CCDC144NL-202ENST00000539177 KRTAP10-2P60368 255 aa10.27□□□□□ -0.77
CCDC144NL-202ENST00000539177 PRSS54Q6PEW0 395 aa10.27□□□□□ -0.77
CCDC144NL-202ENST00000539177 C7orf66A4D0T2 115 aa10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 BSXQ3C1V8 233 aa10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 Q6ZNX1 250 aa10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 MAGT1Q9H0U3 335 aa10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 LINC00588Q9Y4M8 146 aa10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 ALG5Q9Y673 324 aa10.26□□□□□ -0.77
CCDC144NL-202ENST00000539177 A0A0G2JRQ6 117 aa10.25□□□□□ -0.77
CCDC144NL-202ENST00000539177 F5H768 121 aa10.25□□□□□ -0.77
CCDC144NL-202ENST00000539177 PRM2P04554 102 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms