RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 STXBP6Q8NFX7 210 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 MBD3L1Q8WWY6 194 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 METTL26Q96S19 204 aa11.91□□□□□ -0.5
VAMP1-207ENST00000539047 TRAV1-1A0A0B4J248 108 aa11.9□□□□□ -0.5
VAMP1-207ENST00000539047 C8orf88P0DMB2 117 aa11.9□□□□□ -0.5
VAMP1-207ENST00000539047 IL34Q6ZMJ4 242 aa11.9□□□□□ -0.5
VAMP1-207ENST00000539047 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
VAMP1-207ENST00000539047 DPF1Q92782 380 aa11.9□□□□□ -0.5
VAMP1-207ENST00000539047 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.5
VAMP1-207ENST00000539047 TSSC4Q9Y5U2 329 aaPredicted RBP11.9□□□□□ -0.5
VAMP1-207ENST00000539047 IGHV3-35A0A0C4DH35 117 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 A0A1B0GV50 99 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 OR7C2O60412 319 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 HSPB1P04792 205 aaKnown RBP11.89□□□□□ -0.51
VAMP1-207ENST00000539047 BMI1P35226 326 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 PROK1P58294 105 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 KIAA0141Q14154 515 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-207ENST00000539047 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 TMEM37Q8WXS4 190 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 MDFIQ99750 246 aa11.89□□□□□ -0.51
VAMP1-207ENST00000539047 SEPSECSQ9HD40 501 aaKnown RBP11.89□□□□□ -0.51
VAMP1-207ENST00000539047 HMGB3O15347 200 aaKnown RBP11.88□□□□□ -0.51
VAMP1-207ENST00000539047 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 ARL14EPLP0DKL9 152 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 PSMB3P49720 205 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 SRSF2Q01130 221 aaKnown RBP11.88□□□□□ -0.51
VAMP1-207ENST00000539047 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 COMMD7Q86VX2 200 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 WIPF2Q8TF74 440 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-207ENST00000539047 GRAMD2BQ96HH9 432 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-207ENST00000539047 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
VAMP1-207ENST00000539047 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
VAMP1-207ENST00000539047 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 LINC00862A6NCI5 91 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 H3BRN7 92 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 CD28P10747 220 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 NPPCP23582 126 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 TAGLN2P37802 199 aaKnown RBP11.87□□□□□ -0.51
VAMP1-207ENST00000539047 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-207ENST00000539047 USF2Q15853 346 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-207ENST00000539047 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-207ENST00000539047 LYPD6BQ8NI32 183 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 SHANK2-AS3Q9BTD1 123 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 TMEM231Q9H6L2 316 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 TMEM167BQ9NRX6 74 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 SVEP1Q4LDE5 3571 aa11.87□□□□□ -0.51
VAMP1-207ENST00000539047 LINC01619G3V211 115 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 I3L521 148 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 UBE2L3P68036 154 aaKnown RBP11.86□□□□□ -0.51
VAMP1-207ENST00000539047 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 GPHB5Q86YW7 130 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 GPR82Q96P67 336 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
VAMP1-207ENST00000539047 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 A0A087WW49 117 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 A0A1W2PRX2 142 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 A0A1W2PS18 150 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 GCHFRP30047 84 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 C1QL4Q86Z23 238 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 OR4F17Q8NGA8 305 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 OR1N2Q8NGR9 330 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
VAMP1-207ENST00000539047 SCRT1Q9BWW7 348 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 SLC25A2Q9BXI2 301 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
VAMP1-207ENST00000539047 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
VAMP1-207ENST00000539047 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 RAB19A4D1S5 217 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 ZNF98A6NK75 572 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 M0QZ24 198 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 RPL7P18124 248 aaKnown RBP11.84□□□□□ -0.51
VAMP1-207ENST00000539047 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
VAMP1-207ENST00000539047 REC114Q7Z4M0 266 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 OR8I2Q8N0Y5 310 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 OR11H1Q8NG94 326 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 ELOVL1Q9BW60 279 aa11.84□□□□□ -0.51
VAMP1-207ENST00000539047 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
VAMP1-207ENST00000539047 K7EMT4 169 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms