RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 I3L521 148 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
CD4-208ENST00000538827 ZNF207O43670 478 aaKnown RBP10.87□□□□□ -0.67
CD4-208ENST00000538827 HSPB1P04792 205 aaKnown RBP10.87□□□□□ -0.67
CD4-208ENST00000538827 KRTAP10-3P60369 221 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 RHOBP62745 196 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 USF2Q15853 346 aaPredicted RBP10.87□□□□□ -0.67
CD4-208ENST00000538827 FAM78BQ5VT40 261 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 DPPA3Q6W0C5 159 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 IQCF2Q8IXL9 164 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 UHRF2Q96PU4 802 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
CD4-208ENST00000538827 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
CD4-208ENST00000538827 CTXND1A0A1B0GTU2 59 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 WI2-2373I1.2A0A1W2PRP0 233 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 ZNF320A2RRD8 509 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 MAP1LC3B2A6NCE7 125 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 LINC01619G3V211 115 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 NDUFA4O00483 81 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 SLURP1P55000 103 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 PLP1P60201 277 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 ZNF726P1Q15940 193 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 PXDC1Q5TGL8 231 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 LCN15Q6UWW0 184 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 MIR17HGQ75NE6 70 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 SSX7Q7RTT5 188 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 LRRC20Q8TCA0 184 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 GATAD1Q8WUU5 269 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 ZNF414Q96IQ9 312 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 RNF2Q99496 336 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 MRPL32Q9BYC8 188 aaKnown RBP10.86□□□□□ -0.67
CD4-208ENST00000538827 MAP1LC3BQ9GZQ8 125 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 DNAJC4Q9NNZ3 241 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 RABAC1Q9UI14 185 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 FUT9Q9Y231 359 aa10.86□□□□□ -0.67
CD4-208ENST00000538827 ELOA3CA0A087WX78 387 aaPredicted RBP10.85□□□□□ -0.67
CD4-208ENST00000538827 HOXD3P31249 432 aaPredicted RBP10.85□□□□□ -0.67
CD4-208ENST00000538827 FGF8P55075 233 aaPredicted RBP10.85□□□□□ -0.67
CD4-208ENST00000538827 BLOC1S1P78537 153 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 DEFA6Q01524 100 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 PATE2Q6UY27 113 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 LINC00305Q7Z4B0 112 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 RPP25LQ8N5L8 163 aaKnown RBP10.85□□□□□ -0.67
CD4-208ENST00000538827 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 OR1N2Q8NGR9 330 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 TMEM37Q8WXS4 190 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 TMEM190Q8WZ59 177 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 SCRT1Q9BWW7 348 aa10.85□□□□□ -0.67
CD4-208ENST00000538827 TRRAPQ9Y4A5 3859 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 SEC14L6B5MCN3 397 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 H3BRN7 92 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 NMBP08949 121 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 ZP3P21754 424 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 FAM106AQ4KMX7 169 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 PRR31Q5SQ13 230 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 UNQ9165/PRO28630Q6UXU0 137 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 NDUFA11Q86Y39 141 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 SFT2D1Q8WV19 159 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 RAB24Q969Q5 203 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
CD4-208ENST00000538827 METTL26Q96S19 204 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 SLC25A39Q9BZJ4 359 aaPredicted RBP10.84□□□□□ -0.67
CD4-208ENST00000538827 HRH4Q9H3N8 390 aa10.84□□□□□ -0.67
CD4-208ENST00000538827 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
CD4-208ENST00000538827 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 TRAV5A0A0B4J249 113 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 TEX46H3BTG2 121 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 OR7C2O60412 319 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 SYNJ2BPP57105 145 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 TAS2R45P59539 299 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 KHDC3LQ587J8 217 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 MORN5Q5VZ52 161 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 LEMD1Q68G75 181 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 C1QL4Q86Z23 238 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 NARS2Q96I59 477 aaKnown RBP10.83□□□□□ -0.68
CD4-208ENST00000538827 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
CD4-208ENST00000538827 TECRQ9NZ01 308 aaKnown RBP10.83□□□□□ -0.68
CD4-208ENST00000538827 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 CCL24O00175 119 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 HBE1P02100 147 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 C8orf88P0DMB2 117 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 S100A7P31151 101 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 CLLU1Q5K131 121 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 SHANK2-AS3Q9BTD1 123 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 SLC25A2Q9BXI2 301 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
CD4-208ENST00000538827 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
CD4-208ENST00000538827 NPPCP23582 126 aa10.81□□□□□ -0.68
CD4-208ENST00000538827 REC114Q7Z4M0 266 aa10.81□□□□□ -0.68
CD4-208ENST00000538827 GPHB5Q86YW7 130 aa10.81□□□□□ -0.68
CD4-208ENST00000538827 PFDN2Q9UHV9 154 aa10.81□□□□□ -0.68
CD4-208ENST00000538827 ZNF98A6NK75 572 aa10.8□□□□□ -0.68
CD4-208ENST00000538827 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
CD4-208ENST00000538827 CXorf1O96002 111 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms