RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 EML6Q6ZMW3 1958 aa9.99□□□□□ -0.81
USP3-203ENST00000538686 FCGR3BO75015 233 aa9.99□□□□□ -0.81
USP3-203ENST00000538686 ATP5LO75964 103 aa9.99□□□□□ -0.81
USP3-203ENST00000538686 CELA2AP08217 269 aa9.99□□□□□ -0.81
USP3-203ENST00000538686 ITLN1Q8WWA0 313 aa9.99□□□□□ -0.81
USP3-203ENST00000538686 IGHV3-15A0A0B4J1V0 119 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 DPM2O94777 84 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 PAX8Q06710 450 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 UCN2Q96RP3 112 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 PRNDQ9UKY0 176 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 KLF13Q9Y2Y9 288 aaPredicted RBP9.98□□□□□ -0.81
USP3-203ENST00000538686 TRBV7-3A0A075B6L6 115 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 WI2-2373I1.2A0A1W2PRP0 233 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 LILRA5A6NI73 299 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 COX7A2P2O60397 106 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 MYOD1P15172 320 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 TBC1D28Q2M2D7 210 aa9.98□□□□□ -0.81
USP3-203ENST00000538686 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
USP3-203ENST00000538686 LINC00322Q6ZN03 302 aaPredicted RBP9.98□□□□□ -0.81
USP3-203ENST00000538686 RBMXL3Q8N7X1 1067 aaKnown RBP9.98□□□□□ -0.81
USP3-203ENST00000538686 NFAM1Q8NET5 270 aaPredicted RBP9.98□□□□□ -0.81
USP3-203ENST00000538686 IGHV5-51A0A0C4DH38 117 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 A0A1W2PQF6 199 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 SS18L1O75177 396 aaPredicted RBP9.97□□□□□ -0.81
USP3-203ENST00000538686 PSMB2P49721 201 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 FOXF2Q12947 444 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.97□□□□□ -0.81
USP3-203ENST00000538686 C10orf113Q5VZT2 155 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 TUSC5Q8IXB3 177 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 ZNF296Q8WUU4 475 aaPredicted RBP9.97□□□□□ -0.81
USP3-203ENST00000538686 FXYD5Q96DB9 178 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 KIR2DL4Q99706 377 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 TMEM14BQ9NUH8 114 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 MT-CO3P00414 261 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 FAM106CPP0CH98 169 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 CXCL12P48061 93 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 UBE2D3P61077 147 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 UBE2D2P62837 147 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 LOXL1Q08397 574 aaPredicted RBP9.97□□□□□ -0.81
USP3-203ENST00000538686 MRPL23Q16540 153 aaKnown RBP9.97□□□□□ -0.81
USP3-203ENST00000538686 ANXA2RQ3ZCQ2 193 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 FAM106AQ4KMX7 169 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 AAED1Q7RTV5 226 aa9.97□□□□□ -0.81
USP3-203ENST00000538686 USF3Q68DE3 2245 aa9.96□□□□□ -0.81
USP3-203ENST00000538686 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.81
USP3-203ENST00000538686 CIARTQ8N365 385 aaPredicted RBP9.96□□□□□ -0.81
USP3-203ENST00000538686 RASL10AQ92737 203 aa9.96□□□□□ -0.81
USP3-203ENST00000538686 OBP2AQ9NY56 170 aa9.96□□□□□ -0.81
USP3-203ENST00000538686 SIGLEC9Q9Y336 463 aa9.96□□□□□ -0.81
USP3-203ENST00000538686 DIDO1Q9BTC0 2240 aaKnown RBP9.96□□□□□ -0.82
USP3-203ENST00000538686 IGKV1OR2-108A0A075B7D4 117 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 TRBV6-1A0A0K0K1D8 114 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 LOC389332A0A1B0GUA5 103 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 NCBP2LA6PVI3 153 aaKnown RBP9.95□□□□□ -0.82
USP3-203ENST00000538686 IGHG3P01860 377 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 SCGB1C2P0DMR2 95 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 COL8A2P25067 703 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 GNG5P63218 68 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 RPS19BP1Q86WX3 136 aaKnown RBP9.95□□□□□ -0.82
USP3-203ENST00000538686 LRRC75A-AS1Q8N1F1 130 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 AJUBAQ96IF1 538 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 S1PR3Q99500 378 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 RTL8AQ9BWD3 113 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 D6R8Y8 96 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 ZFAND5O76080 213 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 ARMS2P0C7Q2 107 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 PYYP10082 97 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 C2orf83Q53S99 150 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 ZC2HC1BQ5TFG8 222 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 TPPP3Q9BW30 176 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 ZNF407Q9C0G0 2248 aa9.95□□□□□ -0.82
USP3-203ENST00000538686 PDE4DIPQ5VU43 2346 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 CEP350Q5VT06 3117 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 CEP192Q8TEP8 1941 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 TRAV4A0A0B4J268 109 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 IGHV3-20A0A0C4DH32 117 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 PGPA6NDG6 321 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 LINC01546A6NGU7 62 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 FCER1GP30273 86 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 SPRNQ5BIV9 151 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 ZNF766Q5HY98 468 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 TRAV3A0A0B4J244 114 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 OVOL3O00110 214 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 SPINT2O43291 252 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 FOXG1P55316 489 aaPredicted RBP9.94□□□□□ -0.82
USP3-203ENST00000538686 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 ANKRD29Q8N6D5 301 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 PRRG4Q9BZD6 226 aa9.94□□□□□ -0.82
USP3-203ENST00000538686 TRAV8-2A0A0B4J237 113 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 A4D1N5 150 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 NPYP01303 97 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 TCRAP04437 139 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 TNFRSF4P43489 277 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 GTSCR1Q86UQ5 136 aa9.93□□□□□ -0.82
USP3-203ENST00000538686 TTTY13Q9BZ97 58 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms