RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 H3BQ15 152 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 M0QZK8 103 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 OR7C2O60412 319 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 PAGE4O60829 102 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 EIF3GO75821 320 aaKnown RBP eCLIP4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 IGLC1P0CG04 106 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 C8orf88P0DMB2 117 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 APELAP0DMC3 54 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 IGHV4-38-2P0DP08 117 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 FAM120AOSQ5T036 256 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 C10orf113Q5VZT2 155 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 SPATA31B1PQ5VZV4 182 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 C19orf35Q6ZS72 473 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 MIR17HGQ75NE6 70 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 S100A7AQ86SG5 101 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 STXBP6Q8NFX7 210 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 OR4F5Q8NH21 305 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 TMEM190Q8WZ59 177 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 TVP23CQ96ET8 276 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 OR4F4Q96R69 305 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 HSPB9Q9BQS6 159 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 FAM103A1Q9BTL3 118 aaKnown RBP4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 DNAJC4Q9NNZ3 241 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 SMCO4Q9NRQ5 59 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 MRPL36Q9P0J6 103 aaKnown RBP4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 PITPNC1Q9UKF7 332 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 PRELID1Q9Y255 219 aa4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 USP9XQ93008 2570 aaPredicted RBP4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 UBR5O95071 2799 aaPredicted RBP4.3□□□□□ -1.72
NPIPB3-208ENST00000537983 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 A0A1W2PRE2 83 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 C7orf77A4D0Y5 90 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 A6NDX4 124 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 ZNF727A8MUV8 499 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 ATP6V0E1O15342 81 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 HYPMO75409 117 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 TOMM40O96008 361 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 IGHV4-31P0DP07 118 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 GATA2P23769 480 aaPredicted RBP4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 ATP5G3P48201 142 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 CEBPGP53567 150 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 MFAP4P55083 255 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 KRTAP10-9P60411 292 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 UBE2L3P68036 154 aaKnown RBP4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 ZNF90Q03938 601 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 AKIRIN2Q53H80 203 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 KLF17Q5JT82 389 aaPredicted RBP4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 CST9LP1Q5W188 147 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 BRD3OSQ6XYD6 125 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 CBLN2Q8IUK8 224 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 VN1R17PQ8TDU5 208 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 TMEM37Q8WXS4 190 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 C11orf52Q96A22 123 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 FAM167A-AS1Q96KT0 104 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 UHRF2Q96PU4 802 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 ATP6V0BQ99437 205 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 TXN2Q99757 166 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 SSX3Q99909 188 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 SMIM7Q9BQ49 75 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 TCEAL7Q9BRU2 100 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 SLC25A2Q9BXI2 301 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 PARLQ9H300 379 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 TUBA4BQ9H853 241 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 SDF2L1Q9HCN8 221 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 RPS10P5Q9NQ39 176 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 ZNF355PQ9NSJ1 428 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 DOK5Q9P104 306 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 NAT8Q9UHE5 227 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 HIGD1AQ9Y241 93 aa4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 PUS1Q9Y606 427 aaKnown RBP eCLIP4.29□□□□□ -1.72
NPIPB3-208ENST00000537983 TRBV9A0A0B4J1U6 114 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 IGHV3-21A0A0B4J1V1 117 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 SH2D7A6NKC9 451 aaPredicted RBP4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 FAM223BA6NKX1 122 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 H3BUA1 57 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 H3BUX3 64 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 RHODO00212 210 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 GNG7O60262 68 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 OR2C1O95371 312 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 BRI3O95415 125 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 IGKV1-17P01599 117 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 IGHV3-48P01763 117 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 S100A7P31151 101 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 UBE2G2P60604 165 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 YPEL3P61236 119 aaPredicted RBP4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 LYZP61626 148 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 ECSCRQ19T08 205 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 TIGITQ495A1 244 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 UNQ5815/PRO19632Q6UWF5 114 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 PATE2Q6UY27 113 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 C9orf139Q6ZV77 190 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 LINC00305Q7Z4B0 112 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 FAM223AQ8IWN6 122 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 TEX29Q8N6K0 151 aa4.28□□□□□ -1.72
NPIPB3-208ENST00000537983 C15orf54Q8N8G6 183 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms