RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 OR4B1Q8NGF8 309 aa10.02□□□□□ -0.81
SYNE1-235ENST00000537033 DEDD2Q8WXF8 326 aa10.02□□□□□ -0.81
SYNE1-235ENST00000537033 TRIM63Q969Q1 353 aa10.02□□□□□ -0.81
SYNE1-235ENST00000537033 NEU1Q99519 415 aa10.02□□□□□ -0.81
SYNE1-235ENST00000537033 SLC25A21Q9BQT8 299 aaPredicted RBP10.02□□□□□ -0.81
SYNE1-235ENST00000537033 NDUFAF3Q9BU61 184 aa10.02□□□□□ -0.81
SYNE1-235ENST00000537033 BATF3Q9NR55 127 aa10.02□□□□□ -0.81
SYNE1-235ENST00000537033 TMED3Q9Y3Q3 217 aa10.02□□□□□ -0.81
SYNE1-235ENST00000537033 TEX48A0A1B0GUV7 120 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 ISLRO14498 428 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 P0DMU3 169 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 FAM231AP0DMU4 169 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 FAM231CP0DMU5 169 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 S100A5P33763 92 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 GALR1P47211 349 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 MEOX2P50222 304 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 EMP1P54849 157 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 FXYD7P58549 80 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 LRTM2Q8N967 370 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 CLUHP3Q96NS8 147 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 GOLT1BQ9Y3E0 138 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 RFNGQ9Y644 331 aa10.01□□□□□ -0.81
SYNE1-235ENST00000537033 ZNF705FA8MVS1 300 aaPredicted RBP10□□□□□ -0.81
SYNE1-235ENST00000537033 SOCS3O14543 225 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 SYNGR2O43760 224 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 ZNF705DP0CH99 300 aaPredicted RBP10□□□□□ -0.81
SYNE1-235ENST00000537033 ZNF705BP0CI00 300 aaPredicted RBP10□□□□□ -0.81
SYNE1-235ENST00000537033 AKR1C1Q04828 323 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 THAP8Q8NA92 274 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 C16orf92Q96LL3 132 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 C7orf50Q9BRJ6 194 aaKnown RBP10□□□□□ -0.81
SYNE1-235ENST00000537033 SLC25A22Q9H936 323 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 RPRMQ9NS64 109 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 SLC45A2Q9UMX9 530 aa10□□□□□ -0.81
SYNE1-235ENST00000537033 CCDC160A6NGH7 325 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 WRBO00258 174 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 SFT2D2O95562 160 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 PAX9P55771 341 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 DEFB1P60022 68 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 PSG9Q00887 426 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 PPP1R1AQ13522 171 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 ZNF79Q15937 498 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 ZNF709Q8N972 641 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 BPIFCQ8NFQ6 507 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 MAGT1Q9H0U3 335 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 V9GYH0 126 aa9.99□□□□□ -0.81
SYNE1-235ENST00000537033 IGKV1OR2-108A0A075B7D4 117 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 HBE1P02100 147 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 HOXB5P09067 269 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 SPANXN5Q5MJ07 72 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 FAM78BQ5VT40 261 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 LINC00336Q6ZUF6 198 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 POM121L12Q8N7R1 296 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 GPR82Q96P67 336 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 TMEM147Q9BVK8 224 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 SLC35B3Q9H1N7 401 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 SLC25A32Q9H2D1 315 aa9.98□□□□□ -0.81
SYNE1-235ENST00000537033 STRAPQ9Y3F4 350 aaKnown RBP9.98□□□□□ -0.81
SYNE1-235ENST00000537033 A0A0J9YX75 114 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 F6UB75 175 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 ORM2P19652 201 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 INPP1P49441 399 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 UBE2MP61081 183 aaKnown RBP9.97□□□□□ -0.81
SYNE1-235ENST00000537033 OR4D5Q8NGN0 318 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 OR1B1Q8NGR6 318 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 FAM210BQ96KR6 192 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 TMEM208Q9BTX3 173 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 DOK5Q9P104 306 aa9.97□□□□□ -0.81
SYNE1-235ENST00000537033 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 SMCO3A2RU48 225 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 ZNF98A6NK75 572 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 H3BP45 60 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 RRN3P1Q2M238 152 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 SPANXN2Q5MJ10 180 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 ACOT7LQ6ZUV0 252 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 NIPSNAP3BQ9BS92 247 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 DKK2Q9UBU2 259 aa9.96□□□□□ -0.82
SYNE1-235ENST00000537033 PRSS46E5RG02 174 aa9.95□□□□□ -0.82
SYNE1-235ENST00000537033 IFNA21P01568 189 aa9.95□□□□□ -0.82
SYNE1-235ENST00000537033 RAP2BP61225 183 aa9.95□□□□□ -0.82
SYNE1-235ENST00000537033 SCRT1Q9BWW7 348 aa9.95□□□□□ -0.82
SYNE1-235ENST00000537033 DUSP14O95147 198 aaKnown RBP9.94□□□□□ -0.82
SYNE1-235ENST00000537033 HTN3P15516 51 aa9.94□□□□□ -0.82
SYNE1-235ENST00000537033 GATA2P23769 480 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-235ENST00000537033 TRIQKQ629K1 86 aa9.94□□□□□ -0.82
SYNE1-235ENST00000537033 GSG1LQ6UXU4 331 aa9.94□□□□□ -0.82
SYNE1-235ENST00000537033 S100A7AQ86SG5 101 aa9.94□□□□□ -0.82
SYNE1-235ENST00000537033 CCDC190Q86UF4 302 aa9.94□□□□□ -0.82
SYNE1-235ENST00000537033 C20orf173Q96LM9 149 aa9.94□□□□□ -0.82
SYNE1-235ENST00000537033 IGF2BP2-AS1Q96M15 143 aa9.94□□□□□ -0.82
SYNE1-235ENST00000537033 YTHDF2Q9Y5A9 579 aaKnown RBP9.94□□□□□ -0.82
SYNE1-235ENST00000537033 C9orf170A2RU37 121 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 NAP1L6A6NFF2 107 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 A6NHS1 94 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 SSSCA1O60232 199 aa9.93□□□□□ -0.82
SYNE1-235ENST00000537033 INSP01308 110 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms