RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 PRSS3P2Q8NHM4 247 aa4.74□□□□□ -1.65
CHD4-206ENST00000536999 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
CHD4-206ENST00000536999 CT55Q8WUE5 264 aa4.74□□□□□ -1.65
CHD4-206ENST00000536999 LRRC29Q8WV35 223 aa4.74□□□□□ -1.65
CHD4-206ENST00000536999 SNRNP40Q96DI7 357 aaKnown RBP4.74□□□□□ -1.65
CHD4-206ENST00000536999 SCRT2Q9NQ03 307 aa4.74□□□□□ -1.65
CHD4-206ENST00000536999 JKAMPQ9P055 326 aa4.74□□□□□ -1.65
CHD4-206ENST00000536999 COL27A1Q8IZC6 1860 aaPredicted RBP4.74□□□□□ -1.65
CHD4-206ENST00000536999 UNC13CQ8NB66 2214 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 LOC102724200A0A096LPH7 203 aaPredicted RBP4.73□□□□□ -1.65
CHD4-206ENST00000536999 A0A1B0GV72 72 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 GGTLC3B5MD39 225 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 NPIPB6E9PJ23 425 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 LTAP01374 205 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 IGLV1-44P01699 117 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 IGLV2-8P01709 118 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 SLC25A5P05141 298 aaKnown RBP4.73□□□□□ -1.65
CHD4-206ENST00000536999 CELA2AP08217 269 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 NBEAP1P0C6P0 100 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 CGB3P0DN86 165 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 CGB7P0DN87 165 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 HLA-DRB4P13762 266 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 TNFRSF1AP19438 455 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 SSTR5P35346 364 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 GLRXP35754 106 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 MAGEA5P43359 124 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 KIR2DL2P43627 348 aaPredicted RBP4.73□□□□□ -1.65
CHD4-206ENST00000536999 MEOX1P50221 254 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 SLAQ13239 276 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 EDDM3AQ14507 147 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 TAL2Q16559 108 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 RNF151Q2KHN1 245 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 KIAA1644Q3SXP7 199 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 TIMM23BQ5SRD1 257 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 LDLRAD2Q5SZI1 272 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 ATP1A1-AS1Q5TC04 95 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 SPINK14Q6IE38 97 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 WDR86Q86TI4 376 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 ZNF329Q86UD4 541 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 C11orf53Q8IXP5 236 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 CIARTQ8N365 385 aaPredicted RBP4.73□□□□□ -1.65
CHD4-206ENST00000536999 LINC00311Q8N616 119 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 TEX45Q8NA69 505 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 OR9G1Q8NH87 305 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 TMEM167AQ8TBQ9 72 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 BLNKQ8WV28 456 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 CYYR1Q96J86 154 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 MLST8Q9BVC4 326 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 HINT2Q9BX68 163 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 NDUFA4L2Q9NRX3 87 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 HIGD1BQ9P298 99 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 RNF7Q9UBF6 113 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 RPUSD1Q9UJJ7 312 aaKnown RBP4.73□□□□□ -1.65
CHD4-206ENST00000536999 LINC00312Q9Y6C7 94 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 HLA-DRB4X5D2U9 266 aa4.73□□□□□ -1.65
CHD4-206ENST00000536999 IGHV1-24A0A0C4DH33 117 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 A0A0G2JMM0 328 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 A0A1W2PPB8 328 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 PGPA6NDG6 321 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 SRRM4A7MD48 611 aaKnown RBP4.72□□□□□ -1.65
CHD4-206ENST00000536999 KIR3DP1A8MWS1 328 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 F8W1H4 67 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 TAX1BP3O14907 124 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 FOXH1O75593 365 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 LHBP01229 141 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 IGHG3P01860 377 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 IGLC1P0CG04 106 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 RNASE2P10153 161 aaKnown RBP4.72□□□□□ -1.65
CHD4-206ENST00000536999 IGHV1-2P23083 117 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 BMI1P35226 326 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 MYCNOSP40205 109 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 CAMPP49913 170 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 TCL1AP56279 114 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 SRSF2Q01130 221 aaKnown RBP4.72□□□□□ -1.65
CHD4-206ENST00000536999 PDE6HQ13956 83 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 FXYD3Q14802 87 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 MPV17L2Q567V2 206 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 EBLN2Q6P2I7 272 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 UNQ5815/PRO19632Q6UWF5 114 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 ZNF493Q6ZR52 646 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 ZNF833PQ6ZTB9 187 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 FAM19A2Q8N3H0 131 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 TMEM75Q8N9X5 138 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 TMEM116Q8NCL8 245 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 MDS2Q8NDY4 140 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 OR2K2Q8NGT1 345 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 RFESDQ8TAC1 157 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 Q8TCH9 128 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 RNASE8Q8TDE3 154 aaKnown RBP4.72□□□□□ -1.65
CHD4-206ENST00000536999 FAM167A-AS1Q96KT0 104 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 RCHY1Q96PM5 261 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 SLC25A2Q9BXI2 301 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 C12orf49Q9H741 205 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 SIGLEC8Q9NYZ4 499 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 ABCA4P78363 2273 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 POLEQ07864 2286 aa4.72□□□□□ -1.65
CHD4-206ENST00000536999 ZNF469Q96JG9 3925 aaPredicted RBP4.71□□□□□ -1.66
CHD4-206ENST00000536999 LOC105371242A0A075B767 164 aa4.71□□□□□ -1.66
CHD4-206ENST00000536999 TRAV34A0A0B4J273 112 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms