RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 INPP1P49441 399 aa11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 TRIQKQ629K1 86 aa11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 OR8I2Q8N0Y5 310 aa11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 COQ8AQ8NI60 647 aa11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 CCDC32Q9BV29 185 aa11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 MAGT1Q9H0U3 335 aa11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 VPS13DQ5THJ4 4388 aa11.7□□□□□ -0.54
CLSTN3-204ENST00000535313 WRBO00258 174 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 PSMB3P49720 205 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 UBE2MP61081 183 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 ZNF846Q147U1 533 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 GGNBP1Q5YKI7 109 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 Q6ZTC4 211 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 APLNQ9ULZ1 77 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 FRAS1Q86XX4 4008 aa11.69□□□□□ -0.54
CLSTN3-204ENST00000535313 IGKV3-20P01619 116 aa11.68□□□□□ -0.54
CLSTN3-204ENST00000535313 SPANXN5Q5MJ07 72 aa11.68□□□□□ -0.54
CLSTN3-204ENST00000535313 SAMD13Q5VXD3 122 aa11.68□□□□□ -0.54
CLSTN3-204ENST00000535313 FOXI2Q6ZQN5 318 aa11.68□□□□□ -0.54
CLSTN3-204ENST00000535313 SAV1Q9H4B6 383 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-204ENST00000535313 DNAH10Q8IVF4 4471 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 IGKV1OR2-108A0A075B7D4 117 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 ISLRO14498 428 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 UPK1BO75841 260 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 S100A7P31151 101 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 GALR1P47211 349 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 GDF5OSQ5U4N7 250 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 SPATA31B1PQ5VZV4 182 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-204ENST00000535313 NAP1L6A6NFF2 107 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 SOCS3O14543 225 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 MEOX2P50222 304 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 DEFB1P60022 68 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 PRR20EP86478 221 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 PRR20CP86479 221 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 PRR20DP86480 221 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 PRR20BP86481 221 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 PRR20AP86496 221 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 AKR1C1Q04828 323 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 C12orf74Q32Q52 190 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 BPIFCQ8NFQ6 507 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 NEU1Q99519 415 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 SLC25A22Q9H936 323 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 CELA1Q9UNI1 258 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 FLVCR2Q9UPI3 526 aa11.66□□□□□ -0.54
CLSTN3-204ENST00000535313 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 C9orf170A2RU37 121 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 SMIM9A6NGZ8 99 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 PRSS46E5RG02 174 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 H3BP45 60 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 LYRM1O43325 122 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 NDUFB6O95139 128 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 IFNA21P01568 189 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 ORM2P19652 201 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 FXYD7P58549 80 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 ZNF705AQ6ZN79 300 aaPredicted RBP11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 ZNF767PQ75MW2 155 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 C16orf92Q96LL3 132 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 CLUHP3Q96NS8 147 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 C7orf50Q9BRJ6 194 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 RNF126Q9BV68 326 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 TMEM147Q9BVK8 224 aa11.65□□□□□ -0.54
CLSTN3-204ENST00000535313 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 TMEM189A5PLL7 270 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 ZNF98A6NK75 572 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 ADAP1O75689 374 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 ASAH1Q13510 395 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 ACOT7LQ6ZUV0 252 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 OR1B1Q8NGR6 318 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 SLC25A32Q9H2D1 315 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 RPRMQ9NS64 109 aa11.64□□□□□ -0.55
CLSTN3-204ENST00000535313 SMCO3A2RU48 225 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 CENPXA8MT69 81 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 SPART-AS1P0CW21 52 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 GATA2P23769 480 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 EMP1P54849 157 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 PAX9P55771 341 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 POLR2GP62487 172 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 PSG9Q00887 426 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 ID3Q02535 119 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 FAM78BQ5VT40 261 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 GSG1LQ6UXU4 331 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 ZNF709Q8N972 641 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 OR4D5Q8NGN0 318 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 GPR82Q96P67 336 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 RSG1Q9BU20 258 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 PSENENQ9NZ42 101 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 GOLT1BQ9Y3E0 138 aa11.63□□□□□ -0.55
CLSTN3-204ENST00000535313 DNAH6Q9C0G6 4158 aa11.62□□□□□ -0.55
CLSTN3-204ENST00000535313 A0A0J9YX75 114 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms