RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CASQ2O14958 399 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-206ENST00000535290 CIB2O75838 187 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 NXPH3O95157 252 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 GAS8-AS1O95177 125 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 GNAO1P09471 354 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 HSMCR30P0CW71 290 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 RD3LP0DJH9 198 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 HSPA13P48723 471 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 HNRNPA3P51991 378 aaKnown RBP5.53□□□□□ -1.52
CLIP1-206ENST00000535290 HERV-K104P61576 105 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 GPR141Q7Z602 305 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 SLC35G3Q8N808 338 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 MRGPRFQ96AM1 343 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 SLC25A39Q9BZJ4 359 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-206ENST00000535290 CCDC90BQ9GZT6 254 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 TMPRSS5Q9H3S3 457 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 RPRMQ9NS64 109 aa5.53□□□□□ -1.52
CLIP1-206ENST00000535290 TRAV9-2A0A087WT02 112 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 SMIM30A4D0T7 59 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 PDCD5O14737 125 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 TOMM40O96008 361 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 PSG1P11464 419 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 BSXQ3C1V8 233 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 PHLDA2Q53GA4 152 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 ZFP1Q6P2D0 407 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 ZNF493Q6ZR52 646 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 TMEM263Q8WUH6 116 aaKnown RBP5.52□□□□□ -1.53
CLIP1-206ENST00000535290 BORCS5Q969J3 196 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 LY96Q9Y6Y9 160 aa5.52□□□□□ -1.53
CLIP1-206ENST00000535290 TNXBP22105 4242 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 TRAV1-2A0A0B4J238 106 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 PTGES3LE9PB15 166 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 GPR31O00270 319 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 RS1O15537 224 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 ADAP1O75689 374 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 PSMA1P25786 263 aaKnown RBP5.51□□□□□ -1.53
CLIP1-206ENST00000535290 RFX2P48378 723 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 TRAM1Q15629 374 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 IGFL4Q6B9Z1 124 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 LYPD5Q6UWN5 251 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 DHRS11Q6UWP2 260 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 CMTM1Q8IZ96 169 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 TMEM256Q8N2U0 113 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 OR5AP2Q8NGF4 316 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 NPIPB3Q92617 1050 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 LINC00467Q9BRT7 94 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 ZNF2Q9BSG1 426 aaPredicted RBP5.51□□□□□ -1.53
CLIP1-206ENST00000535290 PBDC1Q9BVG4 233 aa5.51□□□□□ -1.53
CLIP1-206ENST00000535290 TRAV18A0A075B6X5 111 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 ZNF98A6NK75 572 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 BOLA2-SMG1P6H3BVE0 249 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 PSCAO43653 123 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 TMEM127O75204 238 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 DUSP14O95147 198 aaKnown RBP5.5□□□□□ -1.53
CLIP1-206ENST00000535290 IGKV1-5P01602 117 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 RLN2P04090 185 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 SLC25A4P12235 298 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 RAB3BP20337 219 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 PSMB9P28065 219 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 SUPT4H1P63272 117 aaKnown RBP5.5□□□□□ -1.53
CLIP1-206ENST00000535290 TBCEQ15813 527 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-206ENST00000535290 LINC01620Q4KN68 170 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 SFXN4Q6P4A7 337 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 WFDC10BQ8IUB3 73 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 DAZAP1Q96EP5 407 aaKnown RBP5.5□□□□□ -1.53
CLIP1-206ENST00000535290 ACY3Q96HD9 319 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 FXYD6Q9H0Q3 95 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 ACOT13Q9NPJ3 140 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 EHFQ9NZC4 300 aa5.5□□□□□ -1.53
CLIP1-206ENST00000535290 MEIS3P1A6NDR6 274 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 SCGNO76038 276 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 EVI2AP22794 236 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 NUP62P37198 522 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-206ENST00000535290 TAS2R20P59543 309 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 C1orf194Q5T5A4 169 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 OR8G2PQ6IF36 304 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 Q6ZTI0 123 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 TBC1D26Q86UD7 250 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 C8orf59Q8N0T1 100 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-206ENST00000535290 OR8I2Q8N0Y5 310 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 DHRSXQ8N5I4 330 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 RNF182Q8N6D2 247 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 TMEM170AQ8WVE7 144 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 ENY2Q9NPA8 101 aa5.49□□□□□ -1.53
CLIP1-206ENST00000535290 FAM212BQ9NTI7 297 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-206ENST00000535290 RRP15Q9Y3B9 282 aaKnown RBP5.49□□□□□ -1.53
CLIP1-206ENST00000535290 TRAV8-2A0A0B4J237 113 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 K7EP13 123 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 PMP2P02689 132 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 CRYGDP07320 174 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 MYL9P24844 172 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 HTR2BP41595 481 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 MLLT11Q13015 90 aaPredicted RBP5.48□□□□□ -1.53
CLIP1-206ENST00000535290 GAMTQ14353 236 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 WFDC2Q14508 124 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 SAMD13Q5VXD3 122 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 SLC24A4Q8NFF2 622 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 CIRBP-AS1Q8TBR5 109 aa5.48□□□□□ -1.53
CLIP1-206ENST00000535290 RSG1Q9BU20 258 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms