RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TOMM40O96008 361 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 OR5AC1P0C628 307 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 PSG1P11464 419 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 PSMB9P28065 219 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 OR10A3P58181 314 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 KRTAP10-8P60410 259 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 SUPT4H1P63272 117 aaKnown RBP6.83□□□□□ -1.32
CSDE1-215ENST00000533818 PRSS54Q6PEW0 395 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 OR8I2Q8N0Y5 310 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 SLC35G3Q8N808 338 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 SLC24A4Q8NFF2 622 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 NUDCD2Q8WVJ2 157 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 HHLA3Q9XRX5 114 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 FUT9Q9Y231 359 aa6.83□□□□□ -1.32
CSDE1-215ENST00000533818 A0A0D9SG52 128 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 A0A0J9YXV3 536 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 INS-IGF2F8WCM5 200 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 SRIP30626 198 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 CRYBA4P53673 196 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 SLAQ13239 276 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 PSG3Q16557 428 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 LINC01556Q5JQF7 62 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 OR8G2PQ6IF36 304 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 C9orf47Q6ZRZ4 202 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 BORCS5Q969J3 196 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 SEC22AQ96IW7 307 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 C8orf49Q96NF6 230 aa6.82□□□□□ -1.32
CSDE1-215ENST00000533818 LOC100130705A0A1B0GUX0 176 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 IGHV3-53P01767 116 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 SLC25A4P12235 298 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 RAB6AP20340 208 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 GNG2P59768 71 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 RPS25P62851 125 aaKnown RBP6.81□□□□□ -1.32
CSDE1-215ENST00000533818 HIST1H1AQ02539 215 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-215ENST00000533818 IDNKQ5T6J7 187 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 IGFL4Q6B9Z1 124 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 RSG1Q9BU20 258 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 ATG5Q9H1Y0 275 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 V9GY05 133 aa6.81□□□□□ -1.32
CSDE1-215ENST00000533818 TRGV1A0A0A0MS02 117 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 E5RGE8 158 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 K7EQD1 137 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 MYL12BO14950 172 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 SSX5O60225 188 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 CBX5P45973 191 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 SPARTQ8N0X7 666 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 RNF182Q8N6D2 247 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 Q8N976 141 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 BEST4Q8NFU0 473 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 PPP1R14BQ96C90 147 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 C20orf144Q9BQM9 153 aa6.8□□□□□ -1.32
CSDE1-215ENST00000533818 GYG2O15488 501 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 NXPH3O95157 252 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 GALR1P47211 349 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 HERV-K104P61576 105 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 OR2F1Q13607 317 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 IZUMO4Q1ZYL8 232 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 FFAR4Q5NUL3 377 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 THAP8Q8NA92 274 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 ZNF738Q8NE65 137 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 BLNKQ8WV28 456 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 IL22RA2Q969J5 263 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 ACY3Q96HD9 319 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 CCDC90BQ9GZT6 254 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 ENY2Q9NPA8 101 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 RPH3ALQ9UNE2 315 aa6.79□□□□□ -1.32
CSDE1-215ENST00000533818 PANO1I0J062 215 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 IGHV3-30P01768 117 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 IGHV3-33P01772 117 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 IGHV3-30-3P0DP02 117 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 IGHV3-30-5P0DP03 117 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 FHL2Q14192 279 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 OR8A1Q8NGG7 326 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 PCNPQ8WW12 178 aaKnown RBP6.78□□□□□ -1.32
CSDE1-215ENST00000533818 MRGPRFQ96AM1 343 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 ST6GAL2Q96JF0 529 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 MRPL32Q9BYC8 188 aaKnown RBP6.78□□□□□ -1.32
CSDE1-215ENST00000533818 GSN-AS1Q9NRJ2 163 aa6.78□□□□□ -1.32
CSDE1-215ENST00000533818 TRAV8-2A0A0B4J237 113 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 RNF222A6NCQ9 220 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 ARL6IP5O75915 188 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 IGKV1-39P01597 117 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 IGKV1D-39P04432 117 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 GATA2P23769 480 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-215ENST00000533818 SCAND1P57086 179 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 LAGE3Q14657 143 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 BSXQ3C1V8 233 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 DNAL1Q4LDG9 190 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 RRNAD1Q96FB5 475 aaKnown RBP6.77□□□□□ -1.33
CSDE1-215ENST00000533818 PDCD10Q9BUL8 212 aa6.77□□□□□ -1.33
CSDE1-215ENST00000533818 RRP15Q9Y3B9 282 aaKnown RBP6.77□□□□□ -1.33
CSDE1-215ENST00000533818 HTR2BP41595 481 aa6.76□□□□□ -1.33
CSDE1-215ENST00000533818 LYZP61626 148 aa6.76□□□□□ -1.33
CSDE1-215ENST00000533818 TMEM91Q6ZNR0 172 aa6.76□□□□□ -1.33
CSDE1-215ENST00000533818 NANOGP1Q8N7R0 232 aa6.76□□□□□ -1.33
CSDE1-215ENST00000533818 TXNDC17Q9BRA2 123 aa6.76□□□□□ -1.33
CSDE1-215ENST00000533818 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms