RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 TIGITQ495A1 244 aa6.56□□□□□ -1.36
PACS1-214ENST00000533811 SPATA12Q7Z6I5 190 aa6.56□□□□□ -1.36
PACS1-214ENST00000533811 TMED4Q7Z7H5 227 aa6.56□□□□□ -1.36
PACS1-214ENST00000533811 TBC1D26Q86UD7 250 aa6.56□□□□□ -1.36
PACS1-214ENST00000533811 C12orf45Q8N5I9 185 aaPredicted RBP6.56□□□□□ -1.36
PACS1-214ENST00000533811 COQ8AQ8NI60 647 aa6.56□□□□□ -1.36
PACS1-214ENST00000533811 MITD1Q8WV92 249 aa6.56□□□□□ -1.36
PACS1-214ENST00000533811 NBDYA0A0U1RRE5 68 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 C3orf85A0A1B0GTC6 90 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 DUXBA0A1W2PPF3 345 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 FAM90A26D6RGX4 464 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 GIPP09681 153 aaPredicted RBP6.55□□□□□ -1.36
PACS1-214ENST00000533811 AKR1C4P17516 323 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 ANXA7P20073 488 aaKnown RBP6.55□□□□□ -1.36
PACS1-214ENST00000533811 HOXA1P49639 335 aaPredicted RBP6.55□□□□□ -1.36
PACS1-214ENST00000533811 DEFB1P60022 68 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 CYCSP99999 105 aaKnown RBP6.55□□□□□ -1.36
PACS1-214ENST00000533811 IZUMO4Q1ZYL8 232 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 ZNF705AQ6ZN79 300 aaPredicted RBP6.55□□□□□ -1.36
PACS1-214ENST00000533811 SEC22AQ96IW7 307 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 NEU1Q99519 415 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 MRPL36Q9P0J6 103 aaKnown RBP6.55□□□□□ -1.36
PACS1-214ENST00000533811 FLVCR2Q9UPI3 526 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
PACS1-214ENST00000533811 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
PACS1-214ENST00000533811 LOC102723971A0A1B0GUV8 181 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 C9orf170A2RU37 121 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 SMIM9A6NGZ8 99 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 CRYM-AS1A6NIL9 109 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
PACS1-214ENST00000533811 CLN5O75503 358 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 ATG12O94817 140 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 SFT2D2O95562 160 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 IGKV1-39P01597 117 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 HBE1P02100 147 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 C1QBP02746 253 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 IGKV1D-39P04432 117 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 ZNF705DP0CH99 300 aaPredicted RBP6.54□□□□□ -1.36
PACS1-214ENST00000533811 ZNF705BP0CI00 300 aaPredicted RBP6.54□□□□□ -1.36
PACS1-214ENST00000533811 HLA-DRB4P13762 266 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 SUB1P53999 127 aaKnown RBP eCLIP6.54□□□□□ -1.36
PACS1-214ENST00000533811 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
PACS1-214ENST00000533811 FGL1Q08830 312 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 MLANAQ16655 118 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 ZFP69Q49AA0 526 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 GSG1LQ6UXU4 331 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 LRTM2Q8N967 370 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 C15orf53Q8NAA6 179 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 OR4B1Q8NGF8 309 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 GLMPQ8WWB7 406 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 ST6GAL2Q96JF0 529 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 HYLS1Q96M11 299 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 NAA60Q9H7X0 242 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 ENY2Q9NPA8 101 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 YTHDF2Q9Y5A9 579 aaKnown RBP6.54□□□□□ -1.36
PACS1-214ENST00000533811 HLA-DRB4X5D2U9 266 aa6.54□□□□□ -1.36
PACS1-214ENST00000533811 RPS10-NUDT3A0A1W2PQS6 291 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 EPM2AB3EWF7 344 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 CORTO00230 105 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 CDS2O95674 445 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 NUDT3O95989 172 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 PET100P0DJ07 73 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 RNASE2P10153 161 aaKnown RBP6.53□□□□□ -1.36
PACS1-214ENST00000533811 VAMP1P23763 118 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 UCP1P25874 307 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 AP2S1P53680 142 aaPredicted RBP6.53□□□□□ -1.36
PACS1-214ENST00000533811 PPP1R1AQ13522 171 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 FCN2Q15485 313 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 SP6Q3SY56 376 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 GDF5OSQ5U4N7 250 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 SIGLEC15Q6ZMC9 328 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 GLYATL2Q8WU03 294 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 IL22RA2Q969J5 263 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 LINC00052Q96N35 136 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 TP53RKQ96S44 253 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 SEC22CQ9BRL7 303 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 PDCD10Q9BUL8 212 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 TMEM222Q9H0R3 208 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
PACS1-214ENST00000533811 NRN1Q9NPD7 142 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 MGAT4CQ9UBM8 478 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 GOLT1BQ9Y3E0 138 aa6.53□□□□□ -1.36
PACS1-214ENST00000533811 IGKV1-17P01599 117 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 OR5AC1P0C628 307 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 INAFM2P0DMQ5 153 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 AKR1C2P52895 323 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 RRN3P1Q2M238 152 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 NOXA1Q86UR1 476 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 LGI3Q8N145 548 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 OR11H7Q8NGC8 314 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 OR1S2Q8NGQ3 325 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 OR4X1Q8NH49 305 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 Q8WTZ3 238 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 RRNAD1Q96FB5 475 aaKnown RBP6.52□□□□□ -1.37
PACS1-214ENST00000533811 SLC35B3Q9H1N7 401 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 TMEM56-RWDD3S4R434 201 aa6.52□□□□□ -1.37
PACS1-214ENST00000533811 U3KQE9 123 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms