RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 SPRNQ5BIV9 151 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 HACD4Q5VWC8 232 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 C22orf39Q6P5X5 142 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 GNPDA2Q8TDQ7 276 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 CARD19Q96LW7 228 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 MRPL57Q9BQC6 102 aaKnown RBP0.34□□□□□ -2.36
BRCA2-205ENST00000533776 MED29Q9NX70 200 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 OPTCQ9UBM4 332 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 PRNDQ9UKY0 176 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 ARL2BPQ9Y2Y0 163 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 FAM32AQ9Y421 112 aaKnown RBP0.34□□□□□ -2.36
BRCA2-205ENST00000533776 ARL5AQ9Y689 179 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 N4BP2Q86UW6 1770 aaPredicted RBP0.34□□□□□ -2.36
BRCA2-205ENST00000533776 LAMA4Q16363 1823 aa0.34□□□□□ -2.36
BRCA2-205ENST00000533776 ARHGEF11O15085 1522 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 MYO5AQ9Y4I1 1855 aaKnown RBP0.33□□□□□ -2.36
BRCA2-205ENST00000533776 COL24A1Q17RW2 1714 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.33□□□□□ -2.36
BRCA2-205ENST00000533776 A0A087WX48 190 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 TRBV6-7A0A0A0MS04 114 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 ZNF736B4DX44 427 aaPredicted RBP0.33□□□□□ -2.36
BRCA2-205ENST00000533776 TMEM238C9JI98 176 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 TMEM256-PLSCR3K7ERE1 68 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 SULT1B1O43704 296 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 MFSD11O43934 449 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 HYPMO75409 117 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 GADD45GO95257 159 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 CRHP06850 196 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 NCALDP61601 193 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 KRR1Q13601 381 aaKnown RBP0.33□□□□□ -2.36
BRCA2-205ENST00000533776 ZNF833PQ6ZTB9 187 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 Q8N814 137 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 SLC30A7Q8NEW0 376 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 OR10K1Q8NGX5 313 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 CDC26Q8NHZ8 85 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 PPTC7Q8NI37 304 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 FAM172AQ8WUF8 416 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 BTF3L4Q96K17 158 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 PSTPIP2Q9H939 334 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 ACER3Q9NUN7 267 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 SS18L2Q9UHA2 77 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 CEP164Q9UPV0 1460 aa0.33□□□□□ -2.36
BRCA2-205ENST00000533776 SIP14410 1827 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 A0A087WSZ3 146 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 HMGB3O15347 200 aaKnown RBP0.32□□□□□ -2.36
BRCA2-205ENST00000533776 CCL16O15467 120 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 TIMM17BO60830 172 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 DHFRP00374 187 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 CSN2P05814 226 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 RHOBP62745 196 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 GNG5P63218 68 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 EIF5AP63241 154 aaKnown RBP0.32□□□□□ -2.36
BRCA2-205ENST00000533776 C1orf134Q5TEV5 83 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 GRINAQ7Z429 371 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 KRTAP19-3Q7Z4W3 81 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 LINC00301Q8NCQ3 95 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 OR2T10Q8NGZ9 312 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 Q8TAT8 98 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 CANT1Q8WVQ1 401 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 LINC00526Q96FQ7 95 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 ZC2HC1AQ96GY0 325 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 GPX7Q96SL4 187 aaPredicted RBP0.32□□□□□ -2.36
BRCA2-205ENST00000533776 HOPXQ9BPY8 73 aaPredicted RBP0.32□□□□□ -2.36
BRCA2-205ENST00000533776 GINS3Q9BRX5 216 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 IMUPQ9GZP8 106 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 C14orf132Q9NPU4 83 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 NHP2Q9NX24 153 aaKnown RBP0.32□□□□□ -2.36
BRCA2-205ENST00000533776 SLC35A3Q9Y2D2 325 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 NAV2Q8IVL1 2488 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 PEAK1Q9H792 1746 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 NISCHQ9Y2I1 1504 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 MAST4O15021 2626 aa0.32□□□□□ -2.36
BRCA2-205ENST00000533776 CD109Q6YHK3 1445 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 ADGBQ8N7X0 1667 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 HEATR1Q9H583 2144 aaKnown RBP0.31□□□□□ -2.36
BRCA2-205ENST00000533776 KMT2DO14686 5537 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 CECR2Q9BXF3 1484 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 CCL25O15444 150 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 NDUFB3O43676 98 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 IFNA7P01567 189 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 ZNF25P17030 456 aaPredicted RBP0.31□□□□□ -2.36
BRCA2-205ENST00000533776 SRP14P37108 136 aaKnown RBP0.31□□□□□ -2.36
BRCA2-205ENST00000533776 DYNLT3P51808 116 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 SPA17Q15506 151 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 LYRM7Q5U5X0 104 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 CLECL1Q8IZS7 167 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 SMIM20Q8N5G0 67 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 Q8N6K4 173 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 TEX37Q96LM6 180 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 LYSMD1Q96S90 227 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 PRRT1Q99946 306 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 CCDC94Q9BW85 323 aaPredicted RBP0.31□□□□□ -2.36
BRCA2-205ENST00000533776 SH3BGRL3Q9H299 93 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 TAF9BQ9HBM6 251 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 CDC42SE1Q9NRR8 79 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 PCTPQ9UKL6 214 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 KLK9Q9UKQ9 250 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 PYCARDQ9ULZ3 195 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 RNF11Q9Y3C5 154 aa0.31□□□□□ -2.36
BRCA2-205ENST00000533776 MYLKQ15746 1914 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms