RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 HLA-DRB4X5D2U9 266 aa11.19□□□□□ -0.62
CPSF1-211ENST00000533492 IGLL5B9A064 214 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 OR4E1P0C645 316 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 HLA-DMBP28068 263 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 S100A7P31151 101 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 PSMB3P49720 205 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 TCTAP57738 103 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 POLR2GP62487 172 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPSF1-211ENST00000533492 ID3Q02535 119 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 C4orf46Q504U0 113 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 SLC25A22Q9H936 323 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 PSENENQ9NZ42 101 aa11.18□□□□□ -0.62
CPSF1-211ENST00000533492 ELOA3CA0A087WX78 387 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-211ENST00000533492 SMCO3A2RU48 225 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 PRSS46E5RG02 174 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 ORM2P19652 201 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 GALR1P47211 349 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 GDF5OSQ5U4N7 250 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 SAMD13Q5VXD3 122 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 ACOT7LQ6ZUV0 252 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 C7orf50Q9BRJ6 194 aaKnown RBP11.17□□□□□ -0.62
CPSF1-211ENST00000533492 SAV1Q9H4B6 383 aaPredicted RBP11.17□□□□□ -0.62
CPSF1-211ENST00000533492 SLC45A2Q9UMX9 530 aa11.17□□□□□ -0.62
CPSF1-211ENST00000533492 EPPK1P58107 5090 aaKnown RBP11.16□□□□□ -0.62
CPSF1-211ENST00000533492 TRAV10A0A0B4J240 114 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 ZNF98A6NK75 572 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 ISLRO14498 428 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
CPSF1-211ENST00000533492 GATA2P23769 480 aaPredicted RBP11.16□□□□□ -0.62
CPSF1-211ENST00000533492 MEOX2P50222 304 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 FXYD7P58549 80 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 DEFB1P60022 68 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 EBLN2Q6P2I7 272 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 OR1B1Q8NGR6 318 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 TMEM147Q9BVK8 224 aa11.16□□□□□ -0.62
CPSF1-211ENST00000533492 SOCS3O14543 225 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 SSSCA1O60232 199 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 DEDDO75618 318 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 IL5P05113 134 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 CNPY1Q3B7I2 92 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 Q6ZTC4 211 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 TMEM144Q7Z5S9 345 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 RPP25LQ8N5L8 163 aaKnown RBP11.15□□□□□ -0.62
CPSF1-211ENST00000533492 OR4D5Q8NGN0 318 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 SMIM8Q96KF7 97 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 SDHCQ99643 169 aaPredicted RBP11.15□□□□□ -0.62
CPSF1-211ENST00000533492 RSG1Q9BU20 258 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 RPRMQ9NS64 109 aa11.15□□□□□ -0.62
CPSF1-211ENST00000533492 IGHV3OR16-12A0A075B7B8 117 aa11.14□□□□□ -0.63
CPSF1-211ENST00000533492 SCGB1D2O95969 90 aa11.14□□□□□ -0.63
CPSF1-211ENST00000533492 IL7P13232 177 aa11.14□□□□□ -0.63
CPSF1-211ENST00000533492 IAH1Q2TAA2 248 aaPredicted RBP11.14□□□□□ -0.63
CPSF1-211ENST00000533492 TMEM182Q6ZP80 229 aaPredicted RBP11.14□□□□□ -0.63
CPSF1-211ENST00000533492 GPR82Q96P67 336 aa11.14□□□□□ -0.63
CPSF1-211ENST00000533492 SLC25A32Q9H2D1 315 aa11.14□□□□□ -0.63
CPSF1-211ENST00000533492 GSKIPQ9P0R6 139 aa11.14□□□□□ -0.63
CPSF1-211ENST00000533492 BTCP35070 178 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 RAP2BP61225 183 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 PSG9Q00887 426 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 CYP2G1PQ6ZSU1 146 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 CLUHP3Q96NS8 147 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 NDUFA13Q9P0J0 144 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 APLNQ9ULZ1 77 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 CELA1Q9UNI1 258 aa11.13□□□□□ -0.63
CPSF1-211ENST00000533492 SMIM9A6NGZ8 99 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 F6UB75 175 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 HYPMO75409 117 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 METTL15P1P0C7V9 234 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 PAX9P55771 341 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 RRAS2P62070 204 aaPredicted RBP11.12□□□□□ -0.63
CPSF1-211ENST00000533492 FGL1Q08830 312 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 FAM78BQ5VT40 261 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 ZNF705AQ6ZN79 300 aaPredicted RBP11.12□□□□□ -0.63
CPSF1-211ENST00000533492 ZNF767PQ75MW2 155 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 OR10P1Q8NGE3 313 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 NEU1Q99519 415 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 SLC35B3Q9H1N7 401 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 NPVFQ9HCQ7 196 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 DOK5Q9P104 306 aa11.12□□□□□ -0.63
CPSF1-211ENST00000533492 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 A0A0J9YX75 114 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 TMEM189A5PLL7 270 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
CPSF1-211ENST00000533492 OR5G3P0C626 314 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 ZNF705DP0CH99 300 aaPredicted RBP11.11□□□□□ -0.63
CPSF1-211ENST00000533492 ZNF705BP0CI00 300 aaPredicted RBP11.11□□□□□ -0.63
CPSF1-211ENST00000533492 EMP1P54849 157 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 SELENOTP62341 195 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 DLK1P80370 383 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 S100A7AQ86SG5 101 aa11.11□□□□□ -0.63
CPSF1-211ENST00000533492 ZBTB8BQ8NAP8 495 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms