RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 NPFFO15130 113 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 TNFSF13O75888 250 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 ADCYAP1P18509 176 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 FOXL1Q12952 345 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 MINOS1Q5TGZ0 78 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 WDR86Q86TI4 376 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 MINOS1-NBL1R4GNA1 71 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 PAX1P15863 534 aa14.32□□□□□ -0.12
PHRF1-205ENST00000533464 PSMB11A5LHX3 300 aa14.32□□□□□ -0.12
PHRF1-205ENST00000533464 OOSP1A8MZH6 123 aa14.32□□□□□ -0.12
PHRF1-205ENST00000533464 TMEM50AO95807 157 aa14.32□□□□□ -0.12
PHRF1-205ENST00000533464 MUC6Q6W4X9 2439 aa14.32□□□□□ -0.12
PHRF1-205ENST00000533464 RNASE2P10153 161 aaKnown RBP14.32□□□□□ -0.12
PHRF1-205ENST00000533464 MOB4Q9Y3A3 225 aa14.32□□□□□ -0.12
PHRF1-205ENST00000533464 LINC00614P0C842 121 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 GZMBP10144 247 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 SAMD13Q5VXD3 122 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 CD7P09564 240 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 CRIM1Q9NZV1 1036 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 MST1LQ2TV78 715 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 PARD6GQ9BYG4 376 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-205ENST00000533464 FAM208BQ5VWN6 2430 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 BRD3OSQ6XYD6 125 aa14.31□□□□□ -0.12
PHRF1-205ENST00000533464 TCRAP04437 139 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 PLP1P60201 277 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 SPSB3Q6PJ21 355 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 HIST3H2BBQ8N257 126 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 MSRB2Q9Y3D2 182 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 M0R1W7 72 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 JOSD1Q15040 202 aaPredicted RBP14.3□□□□□ -0.12
PHRF1-205ENST00000533464 MALRD1Q5VYJ5 2156 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 C9JQL5 133 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 CIRBPQ14011 172 aaKnown RBP14.3□□□□□ -0.12
PHRF1-205ENST00000533464 LINC01587Q99440 93 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 YAE1D1Q9NRH1 226 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 ZNF256Q9Y2P7 627 aaPredicted RBP14.3□□□□□ -0.12
PHRF1-205ENST00000533464 YLPM1P49750 1951 aaKnown RBP14.3□□□□□ -0.12
PHRF1-205ENST00000533464 IGKV2-40A0A087WW87 121 aaPredicted RBP14.3□□□□□ -0.12
PHRF1-205ENST00000533464 IGKV2D-40P01614 121 aaPredicted RBP14.3□□□□□ -0.12
PHRF1-205ENST00000533464 LEPP41159 167 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 VDAC2P45880 294 aaPredicted RBP14.3□□□□□ -0.12
PHRF1-205ENST00000533464 IGFL3Q6UXB1 125 aa14.3□□□□□ -0.12
PHRF1-205ENST00000533464 TRAV21A0A0B4J279 112 aa14.29□□□□□ -0.12
PHRF1-205ENST00000533464 SRD5A1P18405 259 aa14.29□□□□□ -0.12
PHRF1-205ENST00000533464 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.29□□□□□ -0.12
PHRF1-205ENST00000533464 K7ENP7 123 aa14.29□□□□□ -0.12
PHRF1-205ENST00000533464 ITGB1BP1O14713 200 aa14.29□□□□□ -0.12
PHRF1-205ENST00000533464 ERVK11-1P61568 191 aa14.29□□□□□ -0.12
PHRF1-205ENST00000533464 SUMO2P61956 95 aaKnown RBP14.29□□□□□ -0.12
PHRF1-205ENST00000533464 MEIG1Q5JSS6 88 aa14.29□□□□□ -0.12
PHRF1-205ENST00000533464 PEMTQ9UBM1 199 aa14.29□□□□□ -0.12
PHRF1-205ENST00000533464 WIPF3A6NGB9 483 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 COTL1Q14019 142 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 LDLRAD2Q5SZI1 272 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 AMBPP02760 352 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 CD33P20138 364 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 FAM90A2PQ658T7 463 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 SMIM12Q96EX1 92 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 OR10J3Q5JRS4 329 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 PRR31Q5SQ13 230 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 UNQ6494/PRO21346Q6UXR6 183 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 SIGLEC15Q6ZMC9 328 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 SELENOKQ9Y6D0 94 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 ZGRF1Q86YA3 2104 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 ATP5L2Q7Z4Y8 100 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 TTC9CQ8N5M4 171 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 OR5AN1Q8NGI8 311 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 DOCK11Q5JSL3 2073 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 IGLV3-1P01715 115 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 NIT1Q86X76 327 aa14.28□□□□□ -0.12
PHRF1-205ENST00000533464 H3BUX3 64 aa14.27□□□□□ -0.12
PHRF1-205ENST00000533464 PAX9P55771 341 aa14.27□□□□□ -0.12
PHRF1-205ENST00000533464 ZNF418Q8TF45 676 aaPredicted RBP14.27□□□□□ -0.12
PHRF1-205ENST00000533464 GATA4P43694 442 aa14.27□□□□□ -0.13
PHRF1-205ENST00000533464 DUX4L9Q6RFH8 374 aaPredicted RBP14.27□□□□□ -0.13
PHRF1-205ENST00000533464 BPESC1Q9GZL8 116 aa14.27□□□□□ -0.13
PHRF1-205ENST00000533464 TRAV8-1A0A0A6YYK1 113 aa14.27□□□□□ -0.13
PHRF1-205ENST00000533464 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.26□□□□□ -0.13
PHRF1-205ENST00000533464 IGKV1-39P01597 117 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 HBDP02042 147 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 PPBPP02775 128 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 IGKV1D-39P04432 117 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 SMIM13P0DJ93 91 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 C11orf44Q8N8P7 122 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 WFDC12Q8WWY7 111 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 NDUFAF3Q9BU61 184 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 A0A1W2PPI3 338 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 PRTN3P24158 256 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 CEACAM8P31997 349 aaPredicted RBP14.26□□□□□ -0.13
PHRF1-205ENST00000533464 DENND4CQ5VZ89 1909 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 NDUFA3O95167 84 aa14.26□□□□□ -0.13
PHRF1-205ENST00000533464 PEF1Q9UBV8 284 aaKnown RBP14.25□□□□□ -0.13
PHRF1-205ENST00000533464 SPG11Q96JI7 2443 aa14.25□□□□□ -0.13
PHRF1-205ENST00000533464 TMEM155Q4W5P6 130 aa14.25□□□□□ -0.13
PHRF1-205ENST00000533464 B4DSR2 109 aa14.25□□□□□ -0.13
PHRF1-205ENST00000533464 TMEM262E9PQX1 116 aa14.25□□□□□ -0.13
PHRF1-205ENST00000533464 EVI2AP22794 236 aa14.25□□□□□ -0.13
PHRF1-205ENST00000533464 LAMTOR2Q9Y2Q5 125 aa14.25□□□□□ -0.13
PHRF1-205ENST00000533464 C21orf62-AS1Q17RA5 79 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms