RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 BAGE3Q86Y29 109 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 NPBQ8NG41 125 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 Q9H3A6 140 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 BMPR1BO00238 502 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 MT-ND6P03923 174 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 AMY1AP04745 511 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 CDKN1AP38936 164 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 NUP35Q8NFH5 326 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 ZNF586Q9NXT0 402 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 MRPL27Q9P0M9 148 aaKnown RBP12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 S4R3C0 116 aa12.13□□□□□ -0.47
CACNA1E-208ENST00000533229 HES1Q14469 280 aa12.12□□□□□ -0.47
CACNA1E-208ENST00000533229 SRSF8Q9BRL6 282 aaKnown RBP12.12□□□□□ -0.47
CACNA1E-208ENST00000533229 ATG101Q9BSB4 218 aa12.12□□□□□ -0.47
CACNA1E-208ENST00000533229 NCOR2Q9Y618 2525 aa12.12□□□□□ -0.47
CACNA1E-208ENST00000533229 A6NNC1 897 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 TCRAP04437 139 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 CEACAM3P40198 252 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 SLAQ13239 276 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 GDF5OSQ5U4N7 250 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 DTX2Q86UW9 622 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 C5orf17Q8NAS9 161 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 GRAMD2BQ96HH9 432 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 GPR82Q96P67 336 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 RCHY1Q96PM5 261 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 SNHG12Q9BXW3 62 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 NAGKQ9UJ70 344 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 TPPP2P59282 170 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 RPL19P84098 196 aaKnown RBP12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 VMO1Q7Z5L0 202 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 EXOC3-AS1Q8N2X6 119 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 NEU1Q99519 415 aa12.11□□□□□ -0.47
CACNA1E-208ENST00000533229 TRAV8-1A0A0A6YYK1 113 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 SRIP30626 198 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 PAFAH1B2P68402 229 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 C5orf64Q2M2E5 130 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 C17orf77Q96MU5 243 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 HSPB9Q9BQS6 159 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 HIGD1CA8MV81 97 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 TOMM40O96008 361 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 LTAP01374 205 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 PRB4P10163 310 aaPredicted RBP12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 NDPQ00604 133 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 COX19Q49B96 90 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 BCL6BQ8N143 479 aaPredicted RBP12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 TSKUQ8WUA8 353 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 RNF114Q9Y508 228 aa12.1□□□□□ -0.47
CACNA1E-208ENST00000533229 ITPR1Q14643 2758 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 KIR2DL5BA0A0G2JN68 375 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 KIR2DL5BA0A0G2JPC4 375 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 TOX4O94842 621 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 HIST1H1EP10412 219 aaKnown RBP12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 NUTF2P61970 127 aaKnown RBP12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 C1orf194Q5T5A4 169 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 KIR2DL5AQ8N109 375 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 ZNF491Q8N8L2 437 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 TMEM14CQ9P0S9 112 aa12.09□□□□□ -0.47
CACNA1E-208ENST00000533229 APCSP02743 223 aa12.08□□□□□ -0.47
CACNA1E-208ENST00000533229 GPR6P46095 362 aaPredicted RBP12.08□□□□□ -0.47
CACNA1E-208ENST00000533229 OR10J3Q5JRS4 329 aa12.08□□□□□ -0.47
CACNA1E-208ENST00000533229 PRR31Q5SQ13 230 aa12.08□□□□□ -0.47
CACNA1E-208ENST00000533229 WIPF2Q8TF74 440 aaPredicted RBP12.08□□□□□ -0.47
CACNA1E-208ENST00000533229 FMC1Q96HJ9 113 aa12.08□□□□□ -0.47
CACNA1E-208ENST00000533229 PRSS22Q9GZN4 317 aa12.08□□□□□ -0.47
CACNA1E-208ENST00000533229 SPTBN1Q01082 2364 aaKnown RBP12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 ZNF253O75346 499 aa12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 IGLV2-11P01706 119 aa12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 GPX1P07203 203 aa12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 HOXB4P17483 251 aaPredicted RBP12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 TDRG1Q3Y452 100 aa12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 TMEM68Q96MH6 324 aa12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 TBX15Q96SF7 602 aa12.08□□□□□ -0.48
CACNA1E-208ENST00000533229 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 NCBP2LA6PVI3 153 aaKnown RBP12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 TCAPO15273 167 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 ZNF705DP0CH99 300 aaPredicted RBP12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 ZNF705BP0CI00 300 aaPredicted RBP12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 BRS3P32247 399 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 ZNF562Q6V9R5 426 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 C1orf122Q6ZSJ8 110 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 TCF24Q7RTU0 167 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 KIR3DL3Q8N743 410 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 SHANK2-AS3Q9BTD1 123 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 SSBP4Q9BWG4 385 aaPredicted RBP12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 SAMD10Q9BYL1 202 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 OTORQ9NRC9 128 aa12.07□□□□□ -0.48
CACNA1E-208ENST00000533229 IGLV11-55A0A075B6I3 123 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms