RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 TEX22C9J3V5 150 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 INS-IGF2F8WCM5 200 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 M0R143 59 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 ZNF324O75467 553 aaPredicted RBP11.85□□□□□ -0.51
SSH3-210ENST00000532881 RAB4AP20338 218 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 APOBEC3AP31941 199 aaPredicted RBP11.85□□□□□ -0.51
SSH3-210ENST00000532881 MC5RP33032 325 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 TFPI2P48307 235 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 KLRD1Q13241 179 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 CIARTQ8N365 385 aaPredicted RBP11.85□□□□□ -0.51
SSH3-210ENST00000532881 SPTBN1Q01082 2364 aaKnown RBP11.85□□□□□ -0.51
SSH3-210ENST00000532881 TRBV9A0A0B4J1U6 114 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 PPIAL4CA0A0B4J2A2 164 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 PPIAL4GP0DN37 164 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 SCNM1Q9BWG6 230 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 Q9H3A6 140 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 KAAG1Q9UBP8 84 aa11.85□□□□□ -0.51
SSH3-210ENST00000532881 HYPMO75409 117 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 CRYGCP07315 174 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 CRYGBP07316 175 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 GP9P14770 177 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 CASP6P55212 293 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 ARF6P62330 175 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 PERPQ96FX8 193 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 MT-ND6P03923 174 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 LGALS7P47929 136 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 MUC15Q8N387 334 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
SSH3-210ENST00000532881 RNF2Q99496 336 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 ZNF586Q9NXT0 402 aa11.84□□□□□ -0.51
SSH3-210ENST00000532881 CD3EP07766 207 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 TMEM183BQ1AE95 376 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 OR10J3Q5JRS4 329 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 RNASEKQ6P5S7 137 aaKnown RBP11.83□□□□□ -0.52
SSH3-210ENST00000532881 RPEQ96AT9 228 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 GRAMD2BQ96HH9 432 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 VSTM5A8MXK1 200 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 TIMM23O14925 209 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 RPL19P84098 196 aaKnown RBP11.83□□□□□ -0.52
SSH3-210ENST00000532881 CLEC7AQ9BXN2 247 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
SSH3-210ENST00000532881 CNIH1O95406 144 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 ZNF138P52744 262 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 SPATA45Q537H7 98 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 SPATA12Q7Z6I5 190 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 TEX45Q8NA69 505 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 TMEM116Q8NCL8 245 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 MIEN1Q9BRT3 115 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 PRNTQ86SH4 94 aa11.82□□□□□ -0.52
SSH3-210ENST00000532881 MCRIP2Q9BUT9 160 aaKnown RBP11.82□□□□□ -0.52
SSH3-210ENST00000532881 F11RQ9Y624 299 aaKnown RBP11.82□□□□□ -0.52
SSH3-210ENST00000532881 IGHV3-23P01764 117 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 TCRAP04437 139 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
SSH3-210ENST00000532881 MMDQ15546 238 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 ZNF672Q499Z4 452 aaPredicted RBP11.81□□□□□ -0.52
SSH3-210ENST00000532881 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 EBLN2Q6P2I7 272 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 GOLT1AQ6ZVE7 132 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 GPR82Q96P67 336 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 TRGV9Q99603 122 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 IGHV3OR16-8A0A075B7F1 116 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 PRRX1P54821 245 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 LINC00173Q6ZV60 143 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 C8orf31Q8N9H6 132 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 C20orf144Q9BQM9 153 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 MLST8Q9BVC4 326 aa11.81□□□□□ -0.52
SSH3-210ENST00000532881 TIMM8BQ9Y5J9 83 aaPredicted RBP11.81□□□□□ -0.52
SSH3-210ENST00000532881 LBHQ53QV2 105 aaPredicted RBP11.8□□□□□ -0.52
SSH3-210ENST00000532881 Q56UQ5 140 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 FAM231DQ6ZW35 169 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 C8orf46Q8TAG6 207 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 ALKBH7Q9BT30 221 aaPredicted RBP11.8□□□□□ -0.52
SSH3-210ENST00000532881 SLC25A39Q9BZJ4 359 aaPredicted RBP11.8□□□□□ -0.52
SSH3-210ENST00000532881 SPTBN4Q9H254 2564 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 B9A039 149 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 HSBP1O75506 76 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 IGKV1-17P01599 117 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 HIST1H1EP10412 219 aaKnown RBP11.8□□□□□ -0.52
SSH3-210ENST00000532881 NGBQ9NPG2 151 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 HIGD1AQ9Y241 93 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
SSH3-210ENST00000532881 I3L2K1 104 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 ETFRF1Q6IPR1 90 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 SSX8Q7RTT4 187 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 C22orf15Q8WYQ4 148 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 ZNF785A8K8V0 405 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 M0R2Z0 102 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 M0R3E3 92 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 P01737 135 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 Q6ZVH6 145 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 RASL11BQ9BPW5 248 aa11.79□□□□□ -0.52
SSH3-210ENST00000532881 RPP21Q9H633 154 aaKnown RBP11.79□□□□□ -0.52
SSH3-210ENST00000532881 CTRLP40313 264 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms