RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, human

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD7-210	ENST00000531695	REG1B	P48304	166 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	FOXA3	P55318	350 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	TCL1A	P56279	114 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	RBPJ	Q06330	500 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	PMCHL1	Q16048	86 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	FBXL19-AS1	Q494R0	122 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	FAM120AOS	Q5T036	256 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	KRTAP5-3	Q6L8H2	238 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	LINC00305	Q7Z4B0	112 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	VN1R17P	Q8TDU5	208 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	URB1-AS1	Q96HZ7	61 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	RITA1	Q96K30	269 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	LINC00479	Q96M42	142 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	ZNF48	Q96MX3	618 aa	Predicted RBP	4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	RPP21	Q9H633	154 aa	Known RBP	4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	OTOR	Q9NRC9	128 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	UQCR10	Q9UDW1	63 aa		4.59	□□□□□ -1.67
CHD7-210	ENST00000531695	CNOT1	A5YKK6	2376 aa	Known RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	IGHV1-3	A0A0C4DH29	117 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	PGP	A6NDG6	321 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	C2orf70	A6NJV1	201 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	HIGD1C	A8MV81	97 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695		A8MWL6	223 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	BUB1B-PAK6	H3BSN5	160 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695		I3L2K1	104 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	CRX	O43186	299 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	DLEU1	O43261	78 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	CA1	P00915	261 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	IGLV2-11	P01706	119 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	APOH	P02749	345 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	TCRA	P04437	139 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	SLC25A5	P05141	298 aa	Known RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	LINC00614	P0C842	121 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	APOBEC3A	P31941	199 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	KRTDAP	P60985	99 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	UBE2G1	P62253	170 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	GNG5	P63218	68 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	HBB	P68871	147 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	SLC35B1	P78383	322 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	TCF15	Q12870	199 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	TNXA	Q16473	311 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	KIAA1644	Q3SXP7	199 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	RUSC1-AS1	Q66K80	236 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695		Q86TA4	180 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	LYPD1	Q8N2G4	141 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	ARL6IP6	Q8N6S5	226 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	KLHDC1	Q8N7A1	406 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	LY6G5B	Q8NDX9	201 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	H1FX	Q92522	213 aa	Known RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	CHCHD1	Q96BP2	118 aa	Known RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	TMEM68	Q96MH6	324 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	CLEC7A	Q9BXN2	247 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695		Q9H3A6	140 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	SERTAD4	Q9NUC0	356 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	RALY	Q9UKM9	306 aa	Known RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	RNF24	Q9Y225	148 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	MRPS16	Q9Y3D3	137 aa	Known RBP	4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	PAM16	Q9Y3D7	125 aa		4.58	□□□□□ -1.68
CHD7-210	ENST00000531695	TRAV34	A0A0B4J273	112 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	IGHV1-69-2	A0A0G2JMI3	117 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	ZNF785	A8K8V0	405 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695		H3BRN7	92 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	MRPS12	O15235	138 aa	Known RBP	4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	KLK10	O43240	276 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	SPINK4	O60575	86 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	NDUFA3	O95167	84 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	PMCH	P20382	165 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	KLK9	Q2XQG4	91 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	SPATA45	Q537H7	98 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	EBLN2	Q6P2I7	272 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	GFRAL	Q6UXV0	394 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	COX8C	Q7Z4L0	72 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	PPP1R27	Q86WC6	154 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	LINC00482	Q8N8I6	264 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	TMEM75	Q8N9X5	138 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	PRSS33	Q8NF86	280 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	NPB	Q8NG41	125 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	OR1B1	Q8NGR6	318 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	GTSF1	Q8WW33	167 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	SRSF12	Q8WXF0	261 aa	Known RBP	4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	CCL17	Q92583	94 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	BORCS7	Q96B45	105 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	NDFIP1	Q9BT67	221 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	SHANK2-AS3	Q9BTD1	123 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	KRTAP3-1	Q9BYR8	98 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	LPAR2	Q9HBW0	351 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	DYNLRB1	Q9NP97	96 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	KLK9	Q9UKQ9	250 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	HIGD1A	Q9Y241	93 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	WDFY3	Q8IZQ1	3526 aa		4.57	□□□□□ -1.68
CHD7-210	ENST00000531695	MYO15A	Q9UKN7	3530 aa		4.56	□□□□□ -1.68
CHD7-210	ENST00000531695	TRAV9-2	A0A087WT02	112 aa		4.56	□□□□□ -1.68
CHD7-210	ENST00000531695		A0A1B0GW15	77 aa		4.56	□□□□□ -1.68
CHD7-210	ENST00000531695	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.56	□□□□□ -1.68
CHD7-210	ENST00000531695		K7EIM0	57 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms