RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 TMEM186Q96B77 213 aa9.36□□□□□ -0.91
TRIM3-210ENST00000530724 FLYWCH2Q96CP2 140 aaKnown RBP9.36□□□□□ -0.91
TRIM3-210ENST00000530724 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
TRIM3-210ENST00000530724 ZNF71Q9NQZ8 489 aaPredicted RBP9.36□□□□□ -0.91
TRIM3-210ENST00000530724 IGHV3-64DA0A0J9YX35 117 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 K7EM74 188 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 COL8A1P27658 744 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 FABP6P51161 128 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 SSBP2P81877 361 aaPredicted RBP9.35□□□□□ -0.91
TRIM3-210ENST00000530724 TAL2Q16559 108 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 LCNL1Q6ZST4 164 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 CIARTQ8N365 385 aaPredicted RBP9.35□□□□□ -0.91
TRIM3-210ENST00000530724 SPOCK3Q9BQ16 436 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 TM2D2Q9BX73 214 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 SIT1Q9Y3P8 196 aa9.35□□□□□ -0.91
TRIM3-210ENST00000530724 PPIAL4DF5H284 164 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 HBDP02042 147 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 FABP2P12104 132 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.91
TRIM3-210ENST00000530724 MRGPRG-AS1Q2M3A8 158 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 MOGAT3Q86VF5 341 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 UBALD2Q8IYN6 164 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 MRPL20Q9BYC9 149 aaKnown RBP9.34□□□□□ -0.91
TRIM3-210ENST00000530724 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
TRIM3-210ENST00000530724 TP73-AS1Q9UF72 201 aa9.34□□□□□ -0.91
TRIM3-210ENST00000530724 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 CRYGBP07316 175 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 PDE6HQ13956 83 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 MSMPQ1L6U9 139 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 IGFL2Q6UWQ7 119 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 PRSS3P2Q8NHM4 247 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 PHLDA1Q8WV24 401 aaPredicted RBP9.33□□□□□ -0.92
TRIM3-210ENST00000530724 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 DEFB127Q9H1M4 99 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
TRIM3-210ENST00000530724 HIGD1AQ9Y241 93 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
TRIM3-210ENST00000530724 BRWD1Q9NSI6 2320 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 F8W1H4 67 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 H3BUT2 72 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 K7EQM0 130 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 NCR2O95944 276 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 IGHV3-7P01780 117 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 CFIP05156 583 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 PPIAL4GP0DN37 164 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 LINC00696Q6ZRV3 163 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 BHLHA15Q7RTS1 189 aaPredicted RBP9.32□□□□□ -0.92
TRIM3-210ENST00000530724 S100A7AQ86SG5 101 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 LEAP2Q969E1 77 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 FSCN3Q9NQT6 498 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 INSIG2Q9Y5U4 225 aa9.32□□□□□ -0.92
TRIM3-210ENST00000530724 TRBV19A0A075B6N1 114 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 IGHV3OR15-7A0A075B7D8 119 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 A0A1W2PPI3 338 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 PRSS47A8MTI9 375 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 E7EUB6 86 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 J3QR89 54 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 CEACAM4O75871 244 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 AGFG2O95081 481 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 FTH1P19P0C7X4 201 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 SMIM13P0DJ93 91 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 EVI2AP22794 236 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 SAMD13Q5VXD3 122 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 ERASQ7Z444 233 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 ORMDL3Q8N138 153 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 RND1Q92730 232 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 ZNF414Q96IQ9 312 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 VGLL1Q99990 258 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 SCNM1Q9BWG6 230 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 RPH3ALQ9UNE2 315 aa9.31□□□□□ -0.92
TRIM3-210ENST00000530724 CNTRLQ7Z7A1 2325 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 A0A1B0GWB2 263 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 MBD3L4A6NDZ8 208 aaPredicted RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 MBD3L3A6NE82 208 aaPredicted RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 MBD3L5A6NJ08 208 aaPredicted RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 E9PLD3 99 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 TNFRSF13BO14836 293 aaPredicted RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 BMI1P35226 326 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 FOXE3Q13461 319 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 SAMD5Q5TGI4 173 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 ZNF474Q6S9Z5 364 aaPredicted RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 SIGLEC15Q6ZMC9 328 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 C9orf106Q8NAJ2 232 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 MBD3L2Q8NHZ7 208 aaPredicted RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 IFI27L1Q96BM0 104 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 ZC2HC1AQ96GY0 325 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 ZNF48Q96MX3 618 aaPredicted RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 RNF5Q99942 180 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
TRIM3-210ENST00000530724 CACNA1GO43497 2377 aa9.3□□□□□ -0.92
TRIM3-210ENST00000530724 DOCK10Q96BY6 2186 aa9.29□□□□□ -0.92
TRIM3-210ENST00000530724 H3BRN7 92 aa9.29□□□□□ -0.92
TRIM3-210ENST00000530724 MRPS12O15235 138 aaKnown RBP9.29□□□□□ -0.92
TRIM3-210ENST00000530724 ZNF138P52744 262 aa9.29□□□□□ -0.92
TRIM3-210ENST00000530724 NHLH1Q02575 133 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms