RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 THADAQ6YHU6 1953 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 UBE2CO00762 179 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 HOXA3O43365 443 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-220ENST00000529526 SH2D1AO60880 128 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 MLANAQ16655 118 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 ORMDL2Q53FV1 153 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 ZNF329Q86UD4 541 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 RPP25LQ8N5L8 163 aaKnown RBP6.65□□□□□ -1.35
CTNND1-220ENST00000529526 CHCHD1Q96BP2 118 aaKnown RBP6.65□□□□□ -1.35
CTNND1-220ENST00000529526 C5orf30Q96GV9 206 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 RCHY1Q96PM5 261 aa6.65□□□□□ -1.35
CTNND1-220ENST00000529526 TPRP12270 2363 aaKnown RBP6.65□□□□□ -1.35
CTNND1-220ENST00000529526 SNRNP200O75643 2136 aaKnown RBP6.65□□□□□ -1.35
CTNND1-220ENST00000529526 A0A1B0GWJ7 208 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 TMEM8BA6NDV4 472 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 F2Z2F3 143 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 ZNF688P0C7X2 276 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 LAGE3Q14657 143 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 A0A0G2JRQ6 117 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 CRPP02741 224 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 ACTL10Q5JWF8 245 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 GLRX5Q86SX6 157 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 FCN3O75636 299 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 HIST3H2BBQ8N257 126 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 MEGF9Q9H1U4 602 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 TMEM249Q2WGJ8 235 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 OR9G4Q8NGQ1 327 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 HS3ST6Q96QI5 342 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 CITED1Q99966 193 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 LSM4Q9Y4Z0 139 aaKnown RBP6.64□□□□□ -1.35
CTNND1-220ENST00000529526 COLCA2A8K830 154 aa6.64□□□□□ -1.35
CTNND1-220ENST00000529526 NAA38Q9BRA0 125 aaKnown RBP6.64□□□□□ -1.35
CTNND1-220ENST00000529526 GBF1Q92538 1859 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 LINC01551Q86U37 167 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 TRGV9Q99603 122 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 TRAV8-1A0A0A6YYK1 113 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
CTNND1-220ENST00000529526 AMBPP02760 352 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 PPBPP02775 128 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 TMEM14EPQ6UXP3 125 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 ATP5L2Q7Z4Y8 100 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 NDUFAF3Q9BU61 184 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 ERCC8Q13216 396 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 PRR30Q53SZ7 412 aaPredicted RBP6.63□□□□□ -1.35
CTNND1-220ENST00000529526 FAM166AQ6J272 317 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 ORAOV1Q8WV07 137 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 LINC00158P58513 81 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 C5orf64Q2M2E5 130 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 NUP35Q8NFH5 326 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 TRGV1A0A0A0MS02 117 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 RUSC1-AS1Q66K80 236 aa6.63□□□□□ -1.35
CTNND1-220ENST00000529526 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 SMKR1H3BMG3 65 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 IGKV1-16P04430 117 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 SIGLEC9Q9Y336 463 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 SIP14410 1827 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 SLC25A20O43772 301 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 PSG3Q16557 428 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 MINOS1Q5TGZ0 78 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 LCN12Q6JVE5 192 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 REG4Q9BYZ8 158 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 MINOS1-NBL1R4GNA1 71 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-220ENST00000529526 MBD3L3A6NE82 208 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-220ENST00000529526 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-220ENST00000529526 C15orf62A8K5M9 175 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 ZNF138P52744 262 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 DSCR9P59020 149 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 ZNF876PQ49A33 203 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 TMEM256Q8N2U0 113 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 MBD3L2Q8NHZ7 208 aaPredicted RBP6.62□□□□□ -1.35
CTNND1-220ENST00000529526 UBE2E2Q96LR5 201 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 TRBV7-1A0A0A6YYK4 115 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 VGLL1Q99990 258 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
CTNND1-220ENST00000529526 BPESC1Q9GZL8 116 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 ALPK2Q86TB3 2170 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 ASXL3Q9C0F0 2248 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 TMEM242Q9NWH2 141 aa6.62□□□□□ -1.35
CTNND1-220ENST00000529526 SBF1O95248 1867 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 Q6ZRM9 215 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 LCNL1Q6ZST4 164 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 PIP4P2Q8N4L2 257 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 ZSWIM8A7E2V4 1837 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 B4DSR2 109 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 E7EQL1 145 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 M0R1W7 72 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 C14orf178Q8N769 122 aaPredicted RBP6.61□□□□□ -1.35
CTNND1-220ENST00000529526 MAPK1IP1LQ8NDC0 245 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 FHL1Q13642 323 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 RPRMLQ8N4K4 120 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 KLHL30-AS1Q8NEE0 82 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 PRADC1Q9BSG0 188 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 TRBV24-1A0A075B6N3 115 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 A0A087WWL8 130 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 TRAV1-1A0A0B4J248 108 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 THSD7BQ9C0I4 1608 aa6.61□□□□□ -1.35
CTNND1-220ENST00000529526 A0A1B0GW64 132 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 273.8 ms