RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, human

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSTF3-208	ENST00000528865	FBXL19-AS1	Q494R0	122 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	FAM120AOS	Q5T036	256 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	ASPHD1	Q5U4P2	390 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	PRR27	Q6MZM9	219 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865		Q86TA4	180 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	TMEM75	Q8N9X5	138 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	NPB	Q8NG41	125 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	SRSF12	Q8WXF0	261 aa	Known RBP	6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	DAZAP1	Q96EP5	407 aa	Known RBP	6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	SHANK2-AS3	Q9BTD1	123 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	SCNM1	Q9BWG6	230 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	WNT10A	Q9GZT5	417 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	FBXL15	Q9H469	300 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZFP30	Q9Y2G7	519 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	CACNA1H	O95180	2353 aa		6.64	□□□□□ -1.35
CSTF3-208	ENST00000528865	IGHV3-21	A0A0B4J1V1	117 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	PPIAL4C	A0A0B4J2A2	164 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	WI2-2373I1.2	A0A1W2PRP0	233 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865		A6NNC1	897 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865		H3BRN7	92 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865		K7EIM0	57 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	OR5AL1	P0C617	328 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	LINC00614	P0C842	121 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	PPIAL4G	P0DN37	164 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	DMD	P11532	3685 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	G0S2	P27469	103 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	NBL1	P41271	181 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	LHFPL4	Q7Z7J7	247 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	OR11H6	Q8NGC7	330 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	RPE	Q96AT9	228 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	PGLYRP4	Q96LB8	373 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	SGK494	Q96LW2	274 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZNF48	Q96MX3	618 aa	Predicted RBP	6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	GSX1	Q9H4S2	264 aa	Predicted RBP	6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	GOLT1B	Q9Y3E0	138 aa		6.63	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZNF318	Q5VUA4	2279 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	TRBV19	A0A075B6N1	114 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	TRAV30	A0A087WSZ9	112 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865		A0A1B0GW15	77 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	NDUFA3	O95167	84 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	NDUFB8	O95169	186 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	TSPO	P30536	169 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	HNRNPA3	P51991	378 aa	Known RBP	6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	LYZ	P61626	148 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	LDLRAD2	Q5SZI1	272 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	LCN12	Q6JVE5	192 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	RNASEK	Q6P5S7	137 aa	Known RBP	6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865		Q6ZN92	141 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	CIART	Q8N365	385 aa	Predicted RBP	6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	ARL6IP6	Q8N6S5	226 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZNF491	Q8N8L2	437 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	CFHR4	Q92496	578 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	RASL11B	Q9BPW5	248 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	LAMTOR2	Q9Y2Q5	125 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	ARFGEF3	Q5TH69	2177 aa		6.62	□□□□□ -1.35
CSTF3-208	ENST00000528865	CFAP54	Q96N23	3096 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865		M0R1W7	72 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	LIPF	P07098	398 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	IGLL1	P15814	213 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	COX7A1	P24310	79 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	COL8A1	P27658	744 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZNF672	Q499Z4	452 aa	Predicted RBP	6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	LEMD1	Q68G75	181 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	PET117	Q6UWS5	81 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	SIGLEC15	Q6ZMC9	328 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	COX8C	Q7Z4L0	72 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	SPATA12	Q7Z6I5	190 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	PRNT	Q86SH4	94 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	BPIFA4P	Q86YQ2	179 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	EXOC3-AS1	Q8N2X6	119 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	MUC15	Q8N387	334 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	KIR3DL3	Q8N743	410 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	STPG4	Q8N801	248 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	OR2D3	Q8NGH3	330 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	ZNF414	Q96IQ9	312 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	TXN2	Q99757	166 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	TMEM70	Q9BUB7	260 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	RAB1B	Q9H0U4	201 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	DPM3	Q9P2X0	92 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	SH3BGRL2	Q9UJC5	107 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	RPH3AL	Q9UNE2	315 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	PSG8	Q9UQ74	426 aa		6.61	□□□□□ -1.35
CSTF3-208	ENST00000528865	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	SERTM2	A0A1B0GWG4	89 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	SH2D7	A6NKC9	451 aa	Predicted RBP	6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	NPIPB5	A8MRT5	1133 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	ODF3B	A8MYP8	253 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	LYNX1	G3V0Z9	82 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865		H3BTX0	84 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	SYS1-DBNDD2	H3BUS1	97 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865		K7ENP7	123 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	CHEK1	O14757	476 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	NBR2	O15453	112 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	NPS	P0C0P6	89 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	LYNX1	P0DP58	116 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	HTR1D	P28221	377 aa		6.6	□□□□□ -1.35
CSTF3-208	ENST00000528865	DLX1	P56177	255 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms