RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 KLF17Q5JT82 389 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 LINC00518Q8N0U6 118 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BHQ93079 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 FMC1Q96HJ9 113 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BNQ99877 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 HIST1H2BMQ99879 126 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 ATG101Q9BSB4 218 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 C7orf69Q9H7B7 122 aa11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 AURKAIP1Q9NWT8 199 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-220ENST00000528402 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 ZNF320A2RRD8 509 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 J3QLI3 93 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 OR2J3O76001 311 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 CDX1P47902 265 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 RAB9AP51151 201 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 NDUFA6P56556 154 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 UBE2G1P62253 170 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 CLEC12BQ2HXU8 276 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 BAGE2Q86Y30 109 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 ARL6IP6Q8N6S5 226 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 BLNKQ8WV28 456 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 FRZBQ92765 325 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 HSPB9Q9BQS6 159 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 Q9H3A6 140 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 PITPNC1Q9UKF7 332 aa11.59□□□□□ -0.55
ECHDC1-220ENST00000528402 IGSF10Q6WRI0 2623 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 TRBV6-1A0A0K0K1D8 114 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 ATP6V0E1O15342 81 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 BRI3O95415 125 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 IGLV2-8P01709 118 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 PDE6HQ13956 83 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 ACTL10Q5JWF8 245 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 LINC01356Q8N9X3 169 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 GPR82Q96P67 336 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 BEX4Q9NWD9 120 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 V9GYV3 84 aa11.58□□□□□ -0.56
ECHDC1-220ENST00000528402 TRBV7-1A0A0A6YYK4 115 aa11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF98A6NK75 572 aa11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 F8W735 103 aaPredicted RBP11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 HNF1AP20823 631 aa11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 IBA57Q5T440 356 aaKnown RBP11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF502Q8TBZ5 544 aa11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 EEF1AKMT3Q96AZ1 226 aa11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 MED13LQ71F56 2210 aa11.57□□□□□ -0.56
ECHDC1-220ENST00000528402 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 H3BUA1 57 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 K7EQM0 130 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 BMPR1BO00238 502 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 TCRAP04437 139 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 CTSGP08311 255 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 MGST1P10620 155 aaKnown RBP11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 RPL7P18124 248 aaKnown RBP11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 ECSCRQ19T08 205 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 LRRC75A-AS1Q8N1F1 130 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 PIFOQ8TCI5 191 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 HIF1ANQ9NWT6 349 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF586Q9NXT0 402 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 ABCA1O95477 2261 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 AKAP6Q13023 2319 aa11.56□□□□□ -0.56
ECHDC1-220ENST00000528402 SERTM2A0A1B0GWG4 89 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 FAM223BA6NKX1 122 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 IGLC2P0DOY2 106 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 PSG9Q00887 426 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 FAM223AQ8IWN6 122 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 RABAC1Q9UI14 185 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 TRAPPC1Q9Y5R8 145 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 RELNP78509 3460 aa11.55□□□□□ -0.56
ECHDC1-220ENST00000528402 A6NDX4 124 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 FBLL1A6NHQ2 334 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 IGF1P05019 195 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 SMIM6P0DI80 62 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 RPL15P61313 204 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 RHOGP84095 191 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 LOXL1Q08397 574 aaPredicted RBP11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 OR5I1Q13606 314 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 C15orf32Q32M92 178 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 LEMD1Q68G75 181 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 WDR73Q6P4I2 378 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 GRAMD2BQ96HH9 432 aa11.54□□□□□ -0.56
ECHDC1-220ENST00000528402 TRAV41A0A0B4J266 112 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 OR2T8A6NH00 312 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF705GA8MUZ8 300 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 SLC17A3O00476 420 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 MRPS12O15235 138 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 GATCO43716 136 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF253O75346 499 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 MT-ND6P03923 174 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 S100A2P29034 98 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 MEOX2P50222 304 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 ATP5G2Q06055 141 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 USF2Q15853 346 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 RASL11AQ6T310 242 aa11.53□□□□□ -0.56
ECHDC1-220ENST00000528402 ZNF414Q96IQ9 312 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms