RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
CPSF1-203ENST00000527916 C9orf170A2RU37 121 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 KNCNA6PVL3 124 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 ZNF705EA8MWA4 302 aaPredicted RBP7.6□□□□□ -1.19
CPSF1-203ENST00000527916 PRSS46E5RG02 174 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 CDK2AP2O75956 126 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 NDUFB6O95139 128 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 MIFP14174 115 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 NKX2-1P43699 371 aaPredicted RBP7.6□□□□□ -1.19
CPSF1-203ENST00000527916 NUTF2P61970 127 aaKnown RBP7.6□□□□□ -1.19
CPSF1-203ENST00000527916 ZNF90Q03938 601 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 BAK1Q16611 211 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 CNPY1Q3B7I2 92 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 PSMG4Q5JS54 123 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 ACTL10Q5JWF8 245 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 GGNBP1Q5YKI7 109 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 THAP8Q8NA92 274 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 Q8NAQ8 132 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 CSNK1G2-AS1Q8NCQ2 148 aa7.6□□□□□ -1.19
CPSF1-203ENST00000527916 IGKV1OR2-108A0A075B7D4 117 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 H3BMM0 161 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 HOXB5P09067 269 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 IAPPP10997 89 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 INPP1P49441 399 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 ID3Q02535 119 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 Q6ZTC4 211 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 CLUHP3Q96NS8 147 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 C7orf50Q9BRJ6 194 aaKnown RBP7.59□□□□□ -1.19
CPSF1-203ENST00000527916 PBDC1Q9BVG4 233 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 C1QTNF4Q9BXJ3 329 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 SLC45A2Q9UMX9 530 aa7.59□□□□□ -1.19
CPSF1-203ENST00000527916 CENPXA8MT69 81 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 WRBO00258 174 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 AMBPP02760 352 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 HLA-DRB4P13762 266 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 C4BPBP20851 252 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 ID1P41134 155 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 SAMD13Q5VXD3 122 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 TRIQKQ629K1 86 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 COQ8AQ8NI60 647 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 SDHCQ99643 169 aaPredicted RBP7.58□□□□□ -1.2
CPSF1-203ENST00000527916 NDUFAF3Q9BU61 184 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 MAGT1Q9H0U3 335 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 NDUFA13Q9P0J0 144 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 HLA-DRB4X5D2U9 266 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 X6R8D5 127 aa7.58□□□□□ -1.2
CPSF1-203ENST00000527916 DEFB131BA0A096LNP1 70 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 C16orf90A8MZG2 172 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 ADAP1O75689 374 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 IFNA21P01568 189 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 OR4E1P0C645 316 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 RBMY1A1P0DJD3 496 aaKnown RBP7.57□□□□□ -1.2
CPSF1-203ENST00000527916 RBMY1CP0DJD4 496 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 S100A7P31151 101 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 PSMB3P49720 205 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 LYZP61626 148 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 RBMY1FQ15415 496 aaKnown RBP7.57□□□□□ -1.2
CPSF1-203ENST00000527916 SPANXN5Q5MJ07 72 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 SPATA31B1PQ5VZV4 182 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 TMEM144Q7Z5S9 345 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 OR4D5Q8NGN0 318 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 TBC1D24Q9ULP9 559 aa7.57□□□□□ -1.2
CPSF1-203ENST00000527916 PAIP2BQ9ULR5 123 aaKnown RBP7.57□□□□□ -1.2
CPSF1-203ENST00000527916 STRAPQ9Y3F4 350 aaKnown RBP7.57□□□□□ -1.2
CPSF1-203ENST00000527916 IGHV4-28A0A0C4DH34 117 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 ISLRO14498 428 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 SOCS3O14543 225 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 BTCP35070 178 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 MEOX2P50222 304 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 OR2F1Q13607 317 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 FOXI2Q6ZQN5 318 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 UBE2DNLQ8IWF7 75 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 OR8I2Q8N0Y5 310 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 SMIM8Q96KF7 97 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 NEU1Q99519 415 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 WDR12Q9GZL7 423 aaKnown RBP7.56□□□□□ -1.2
CPSF1-203ENST00000527916 SAV1Q9H4B6 383 aaPredicted RBP7.56□□□□□ -1.2
CPSF1-203ENST00000527916 FLVCR2Q9UPI3 526 aa7.56□□□□□ -1.2
CPSF1-203ENST00000527916 SMIM9A6NGZ8 99 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 ZNF98A6NK75 572 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 PMS2P5A8MQ11 134 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 FNDC10F2Z333 226 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 IL7P13232 177 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 PAX9P55771 341 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 TAS2R30P59541 319 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
CPSF1-203ENST00000527916 C1orf134Q5TEV5 83 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 ZNF705AQ6ZN79 300 aaPredicted RBP7.55□□□□□ -1.2
CPSF1-203ENST00000527916 Q6ZR54 194 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 Q8N1X5 172 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 BPIFCQ8NFQ6 507 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 MITD1Q8WV92 249 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 PPP1R14BQ96C90 147 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 GPR82Q96P67 336 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 CLEC5AQ9NY25 188 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 PSENENQ9NZ42 101 aa7.55□□□□□ -1.2
CPSF1-203ENST00000527916 IGLV2-18A0A075B6J9 118 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 ELOA3CA0A087WX78 387 aaPredicted RBP7.54□□□□□ -1.2
CPSF1-203ENST00000527916 GALR1P47211 349 aa7.54□□□□□ -1.2
CPSF1-203ENST00000527916 PLP1P60201 277 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms